Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.9□□□□□ -1.95
CLTCL1P53675 AC087241.2-201ENST00000535801 324 ntBASIC2.9□□□□□ -1.95
CLTCL1P53675 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.9□□□□□ -1.95
CLTCL1P53675 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.9□□□□□ -1.95
CLTCL1P53675 SNRPGP19-201ENST00000603826 189 ntBASIC2.9□□□□□ -1.95
CLTCL1P53675 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.9□□□□□ -1.95
CLTCL1P53675 Y_RNA.783-201ENST00000613546 102 ntBASIC2.9□□□□□ -1.95
CLTCL1P53675 AC092650.2-201ENST00000619984 902 ntBASIC2.9□□□□□ -1.95
CLTCL1P53675 AC138649.5-201ENST00000637456 137 ntBASIC2.9□□□□□ -1.95
CLTCL1P53675 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC2.89□□□□□ -1.95
CLTCL1P53675 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.89□□□□□ -1.95
CLTCL1P53675 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC2.89□□□□□ -1.95
CLTCL1P53675 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLTCL1P53675 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.89□□□□□ -1.95
CLTCL1P53675 AC108729.3-201ENST00000513484 108 ntBASIC2.89□□□□□ -1.95
CLTCL1P53675 SNORA31.15-201ENST00000516771 132 ntBASIC2.89□□□□□ -1.95
CLTCL1P53675 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
CLTCL1P53675 FAM92A1P1-201ENST00000528023 890 ntBASIC2.89□□□□□ -1.95
CLTCL1P53675 NSRP1P1-201ENST00000444067 1693 ntBASIC2.88□□□□□ -1.95
CLTCL1P53675 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLTCL1P53675 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
CLTCL1P53675 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.88□□□□□ -1.95
CLTCL1P53675 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.88□□□□□ -1.95
CLTCL1P53675 SNORA26.9-201ENST00000391322 122 ntBASIC2.88□□□□□ -1.95
CLTCL1P53675 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.88□□□□□ -1.95
CLTCL1P53675 AF274854.1-201ENST00000413236 615 ntBASIC2.88□□□□□ -1.95
CLTCL1P53675 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.88□□□□□ -1.95
CLTCL1P53675 AC008173.1-201ENST00000418901 264 ntBASIC2.88□□□□□ -1.95
CLTCL1P53675 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.88□□□□□ -1.95
CLTCL1P53675 AL591719.1-201ENST00000444669 744 ntBASIC2.88□□□□□ -1.95
CLTCL1P53675 AC090071.1-201ENST00000507713 644 ntBASIC2.88□□□□□ -1.95
CLTCL1P53675 SNORA31.26-201ENST00000517250 137 ntBASIC2.88□□□□□ -1.95
CLTCL1P53675 AC093673.2-201ENST00000609674 331 ntBASIC2.88□□□□□ -1.95
CLTCL1P53675 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CLTCL1P53675 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CLTCL1P53675 RNU1-17P-201ENST00000363022 152 ntBASIC2.87□□□□□ -1.95
CLTCL1P53675 EI24P1-201ENST00000416584 867 ntBASIC2.87□□□□□ -1.95
CLTCL1P53675 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.87□□□□□ -1.95
CLTCL1P53675 AP000852.1-201ENST00000472460 573 ntBASIC2.87□□□□□ -1.95
CLTCL1P53675 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.87□□□□□ -1.95
CLTCL1P53675 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.87□□□□□ -1.95
CLTCL1P53675 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CLTCL1P53675 RN7SKP226-201ENST00000364912 300 ntBASIC2.86□□□□□ -1.95
CLTCL1P53675 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.86□□□□□ -1.95
CLTCL1P53675 RPL23AP36-201ENST00000413895 458 ntBASIC2.86□□□□□ -1.95
CLTCL1P53675 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.86□□□□□ -1.95
CLTCL1P53675 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.86□□□□□ -1.95
CLTCL1P53675 RPL34P26-201ENST00000445636 354 ntBASIC2.86□□□□□ -1.95
CLTCL1P53675 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.86□□□□□ -1.95
CLTCL1P53675 GZMAP1-201ENST00000503054 631 ntBASIC2.86□□□□□ -1.95
CLTCL1P53675 AC098799.2-201ENST00000509466 868 ntBASIC2.86□□□□□ -1.95
CLTCL1P53675 AC012531.5-201ENST00000611375 151 ntBASIC2.86□□□□□ -1.95
CLTCL1P53675 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.86□□□□□ -1.95
CLTCL1P53675 HMGN2P35-201ENST00000412164 270 ntBASIC2.86□□□□□ -1.95
CLTCL1P53675 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.86□□□□□ -1.95
CLTCL1P53675 DPPA2P1-201ENST00000428060 556 ntBASIC2.86□□□□□ -1.95
CLTCL1P53675 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.86□□□□□ -1.95
CLTCL1P53675 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.86□□□□□ -1.95
CLTCL1P53675 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.86□□□□□ -1.95
CLTCL1P53675 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.86□□□□□ -1.95
CLTCL1P53675 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.86□□□□□ -1.95
CLTCL1P53675 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.86□□□□□ -1.95
CLTCL1P53675 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.86□□□□□ -1.95
CLTCL1P53675 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.86□□□□□ -1.95
CLTCL1P53675 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.86□□□□□ -1.95
CLTCL1P53675 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.86□□□□□ -1.95
CLTCL1P53675 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC2.86□□□□□ -1.95
CLTCL1P53675 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.86□□□□□ -1.95
CLTCL1P53675 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.86□□□□□ -1.95
CLTCL1P53675 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
CLTCL1P53675 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC2.85□□□□□ -1.95
CLTCL1P53675 FAM35CP-201ENST00000554755 2470 ntBASIC2.85□□□□□ -1.95
CLTCL1P53675 AC093775.1-201ENST00000624154 1868 ntBASIC2.85□□□□□ -1.95
CLTCL1P53675 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CLTCL1P53675 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.85□□□□□ -1.95
CLTCL1P53675 MIR1287-201ENST00000408492 90 ntBASIC2.85□□□□□ -1.95
CLTCL1P53675 SPA17P1-201ENST00000416656 452 ntBASIC2.85□□□□□ -1.95
CLTCL1P53675 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.85□□□□□ -1.95
CLTCL1P53675 RSL24D1P2-201ENST00000445584 366 ntBASIC2.85□□□□□ -1.95
CLTCL1P53675 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.85□□□□□ -1.95
CLTCL1P53675 SNORD13-201ENST00000459299 104 ntBASIC2.85□□□□□ -1.95
CLTCL1P53675 RPL36AP21-201ENST00000490372 323 ntBASIC2.85□□□□□ -1.95
CLTCL1P53675 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.85□□□□□ -1.95
CLTCL1P53675 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.85□□□□□ -1.95
CLTCL1P53675 AP003499.2-201ENST00000624100 483 ntBASIC2.85□□□□□ -1.95
CLTCL1P53675 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.84□□□□□ -1.95
CLTCL1P53675 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.84□□□□□ -1.95
CLTCL1P53675 API5P2-201ENST00000397055 1498 ntBASIC2.84□□□□□ -1.95
CLTCL1P53675 RNA5SP213-201ENST00000391031 106 ntBASIC2.84□□□□□ -1.95
CLTCL1P53675 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.84□□□□□ -1.95
CLTCL1P53675 AL109741.2-201ENST00000455561 343 ntBASIC2.84□□□□□ -1.95
CLTCL1P53675 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.84□□□□□ -1.95
CLTCL1P53675 HMGB3P15-201ENST00000507326 574 ntBASIC2.84□□□□□ -1.95
CLTCL1P53675 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.84□□□□□ -1.95
CLTCL1P53675 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.84□□□□□ -1.95
CLTCL1P53675 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
CLTCL1P53675 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.84□□□□□ -1.95
CLTCL1P53675 AC016542.2-201ENST00000624201 619 ntBASIC2.84□□□□□ -1.95
CLTCL1P53675 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CLTCL1P53675 RPL7P54-201ENST00000438336 674 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms