Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 CKS1BP5-201ENST00000434172 273 ntBASIC3.97□□□□□ -1.77
CLCN3P51790 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.97□□□□□ -1.77
CLCN3P51790 AC092641.1-201ENST00000440229 772 ntBASIC3.97□□□□□ -1.77
CLCN3P51790 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.97□□□□□ -1.77
CLCN3P51790 AL162388.1-201ENST00000450912 352 ntBASIC3.97□□□□□ -1.77
CLCN3P51790 HMGB3P22-202ENST00000451823 572 ntBASIC3.97□□□□□ -1.77
CLCN3P51790 MTCO3P16-201ENST00000454456 754 ntBASIC3.97□□□□□ -1.77
CLCN3P51790 AC099563.1-201ENST00000456086 418 ntBASIC3.97□□□□□ -1.77
CLCN3P51790 SNORD108-201ENST00000459332 71 ntBASIC3.97□□□□□ -1.77
CLCN3P51790 RPL30P6-201ENST00000475925 342 ntBASIC3.97□□□□□ -1.77
CLCN3P51790 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.97□□□□□ -1.77
CLCN3P51790 TMEM251P1-201ENST00000503717 318 ntBASIC3.97□□□□□ -1.77
CLCN3P51790 AC004069.2-201ENST00000505438 1114 ntBASIC3.97□□□□□ -1.77
CLCN3P51790 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.97□□□□□ -1.77
CLCN3P51790 AC005178.1-201ENST00000508392 440 ntBASIC3.97□□□□□ -1.77
CLCN3P51790 AC109458.1-201ENST00000508858 316 ntBASIC3.97□□□□□ -1.77
CLCN3P51790 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.97□□□□□ -1.77
CLCN3P51790 MTCO3P44-201ENST00000510977 541 ntBASIC3.97□□□□□ -1.77
CLCN3P51790 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CLCN3P51790 RN7SKP116-201ENST00000516902 319 ntBASIC3.97□□□□□ -1.77
CLCN3P51790 IGKV2D-36-201ENST00000518643 226 ntBASIC3.97□□□□□ -1.77
CLCN3P51790 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.97□□□□□ -1.77
CLCN3P51790 OR4R3P-201ENST00000525084 838 ntBASIC3.97□□□□□ -1.77
CLCN3P51790 AC239860.2-201ENST00000525886 270 ntBASIC3.97□□□□□ -1.77
CLCN3P51790 AP003385.6-201ENST00000531603 374 ntBASIC3.97□□□□□ -1.77
CLCN3P51790 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.97□□□□□ -1.77
CLCN3P51790 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.97□□□□□ -1.77
CLCN3P51790 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.97□□□□□ -1.77
CLCN3P51790 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.97□□□□□ -1.77
CLCN3P51790 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.97□□□□□ -1.77
CLCN3P51790 AP001981.2-201ENST00000603241 418 ntBASIC3.97□□□□□ -1.77
CLCN3P51790 AP000811.1-201ENST00000603803 651 ntBASIC3.97□□□□□ -1.77
CLCN3P51790 AC007179.3-201ENST00000604976 235 ntBASIC3.97□□□□□ -1.77
CLCN3P51790 RNU6-88P-201ENST00000606801 100 ntBASIC3.97□□□□□ -1.77
CLCN3P51790 OR2AS2P-201ENST00000606902 342 ntBASIC3.97□□□□□ -1.77
CLCN3P51790 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.97□□□□□ -1.77
CLCN3P51790 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.97□□□□□ -1.77
CLCN3P51790 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.97□□□□□ -1.77
CLCN3P51790 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.97□□□□□ -1.77
CLCN3P51790 U4.6-201ENST00000621618 127 ntBASIC3.97□□□□□ -1.77
CLCN3P51790 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.97□□□□□ -1.77
CLCN3P51790 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLCN3P51790 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLCN3P51790 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLCN3P51790 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.97□□□□□ -1.77
CLCN3P51790 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLCN3P51790 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.97□□□□□ -1.77
CLCN3P51790 AL356473.1-201ENST00000406203 1408 ntBASIC3.96□□□□□ -1.77
CLCN3P51790 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CLCN3P51790 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.96□□□□□ -1.77
CLCN3P51790 AP002907.1-201ENST00000606361 1430 ntBASIC3.96□□□□□ -1.77
CLCN3P51790 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.96□□□□□ -1.77
CLCN3P51790 PRO1804-201ENST00000623780 2050 ntBASIC3.96□□□□□ -1.77
CLCN3P51790 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.96□□□□□ -1.78
CLCN3P51790 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLCN3P51790 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.96□□□□□ -1.78
CLCN3P51790 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.96□□□□□ -1.78
CLCN3P51790 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLCN3P51790 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLCN3P51790 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLCN3P51790 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.96□□□□□ -1.78
CLCN3P51790 RPL23AP57-201ENST00000332361 466 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 RNU6-462P-201ENST00000362659 105 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 RNU6-374P-201ENST00000364146 108 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 SNORD82-201ENST00000365530 70 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLCN3P51790 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.96□□□□□ -1.78
CLCN3P51790 MT-TC-201ENST00000387405 66 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 AL138880.1-201ENST00000405824 642 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 RPL23AP48-201ENST00000406913 488 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 RNA5SP56-201ENST00000410277 118 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.96□□□□□ -1.78
CLCN3P51790 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.96□□□□□ -1.78
CLCN3P51790 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.96□□□□□ -1.78
CLCN3P51790 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.96□□□□□ -1.78
CLCN3P51790 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.96□□□□□ -1.78
CLCN3P51790 AC234781.2-201ENST00000426370 994 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 AL589823.1-201ENST00000429577 183 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.96□□□□□ -1.78
CLCN3P51790 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.96□□□□□ -1.78
CLCN3P51790 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.96□□□□□ -1.78
CLCN3P51790 AC127537.2-201ENST00000439258 465 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 TAF9P1-201ENST00000445421 515 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.96□□□□□ -1.78
CLCN3P51790 RPL23AP35-201ENST00000451906 501 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.96□□□□□ -1.78
CLCN3P51790 TAF9P2-201ENST00000454958 515 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 SUMO2P2-201ENST00000456482 255 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 AC025518.1-201ENST00000479856 347 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.96□□□□□ -1.78
CLCN3P51790 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.96□□□□□ -1.78
CLCN3P51790 AC104685.1-201ENST00000502445 371 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.96□□□□□ -1.78
CLCN3P51790 AC074250.1-201ENST00000511117 192 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 AC010342.1-201ENST00000514047 877 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 MTCO2P32-201ENST00000514865 403 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.96□□□□□ -1.78
CLCN3P51790 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.96□□□□□ -1.78
CLCN3P51790 RNU6-678P-201ENST00000516832 109 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms