Protein–RNA interactions for Protein: P49711

CTCF, Transcriptional repressor CTCF, humanhuman

Predicted RBP Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFP49711 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.28□□□□□ -1.72
CTCFP49711 AC008127.2-201ENST00000549925 1075 ntBASIC4.28□□□□□ -1.72
CTCFP49711 ZNF321P-202ENST00000550843 495 ntBASIC4.28□□□□□ -1.72
CTCFP49711 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.28□□□□□ -1.72
CTCFP49711 AC007599.1-201ENST00000568688 1174 ntBASIC4.28□□□□□ -1.72
CTCFP49711 OR4G1P-201ENST00000588632 938 ntBASIC4.28□□□□□ -1.72
CTCFP49711 AL592221.1-201ENST00000605266 382 ntBASIC4.28□□□□□ -1.72
CTCFP49711 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.28□□□□□ -1.72
CTCFP49711 AL139418.1-201ENST00000613613 177 ntBASIC4.28□□□□□ -1.72
CTCFP49711 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.28□□□□□ -1.72
CTCFP49711 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CTCFP49711 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTCFP49711 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.28□□□□□ -1.72
CTCFP49711 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.28□□□□□ -1.72
CTCFP49711 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.28□□□□□ -1.72
CTCFP49711 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.28□□□□□ -1.72
CTCFP49711 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
CTCFP49711 RIOK3P1-201ENST00000418778 1528 ntBASIC4.27□□□□□ -1.73
CTCFP49711 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CTCFP49711 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.27□□□□□ -1.73
CTCFP49711 AC005539.1-201ENST00000443768 1479 ntBASIC4.27□□□□□ -1.73
CTCFP49711 MIR423-201ENST00000362201 94 ntBASIC4.27□□□□□ -1.73
CTCFP49711 MIR199A2-201ENST00000385289 110 ntBASIC4.27□□□□□ -1.73
CTCFP49711 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CTCFP49711 Z98941.1-201ENST00000407764 100 ntBASIC4.27□□□□□ -1.73
CTCFP49711 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.27□□□□□ -1.73
CTCFP49711 PGBD4P8-201ENST00000412993 562 ntBASIC4.27□□□□□ -1.73
CTCFP49711 TIMM9P2-201ENST00000419324 266 ntBASIC4.27□□□□□ -1.73
CTCFP49711 PTP4A1P5-201ENST00000420305 455 ntBASIC4.27□□□□□ -1.73
CTCFP49711 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CTCFP49711 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.27□□□□□ -1.73
CTCFP49711 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.27□□□□□ -1.73
CTCFP49711 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.27□□□□□ -1.73
CTCFP49711 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.27□□□□□ -1.73
CTCFP49711 MTCYBP17-201ENST00000503579 789 ntBASIC4.27□□□□□ -1.73
CTCFP49711 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.27□□□□□ -1.73
CTCFP49711 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.27□□□□□ -1.73
CTCFP49711 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.27□□□□□ -1.73
CTCFP49711 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.27□□□□□ -1.73
CTCFP49711 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.27□□□□□ -1.73
CTCFP49711 SNORA3.4-201ENST00000515969 96 ntBASIC4.27□□□□□ -1.73
CTCFP49711 AP001636.2-201ENST00000525517 696 ntBASIC4.27□□□□□ -1.73
CTCFP49711 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.27□□□□□ -1.73
CTCFP49711 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.27□□□□□ -1.73
CTCFP49711 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.27□□□□□ -1.73
CTCFP49711 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.27□□□□□ -1.73
CTCFP49711 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.27□□□□□ -1.73
CTCFP49711 VN1R82P-201ENST00000601481 356 ntBASIC4.27□□□□□ -1.73
CTCFP49711 AC103881.1-201ENST00000603476 538 ntBASIC4.27□□□□□ -1.73
CTCFP49711 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.27□□□□□ -1.73
CTCFP49711 AC120349.3-201ENST00000624377 529 ntBASIC4.27□□□□□ -1.73
CTCFP49711 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.27□□□□□ -1.73
CTCFP49711 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CTCFP49711 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CTCFP49711 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CTCFP49711 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.27□□□□□ -1.73
CTCFP49711 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTCFP49711 ZNF37BP-203ENST00000452306 1352 ntBASIC4.27□□□□□ -1.73
CTCFP49711 MTND4P34-201ENST00000572715 1371 ntBASIC4.27□□□□□ -1.73
CTCFP49711 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CTCFP49711 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
CTCFP49711 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTCFP49711 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CTCFP49711 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.26□□□□□ -1.73
CTCFP49711 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.26□□□□□ -1.73
CTCFP49711 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CTCFP49711 RNU4-35P-201ENST00000362588 141 ntBASIC4.26□□□□□ -1.73
CTCFP49711 AC016769.3-201ENST00000396562 315 ntBASIC4.26□□□□□ -1.73
CTCFP49711 AF228730.1-201ENST00000397972 663 ntBASIC4.26□□□□□ -1.73
CTCFP49711 AL024474.1-201ENST00000404655 591 ntBASIC4.26□□□□□ -1.73
CTCFP49711 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.26□□□□□ -1.73
CTCFP49711 AL158071.1-201ENST00000430315 461 ntBASIC4.26□□□□□ -1.73
CTCFP49711 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.26□□□□□ -1.73
CTCFP49711 RPL7P34-201ENST00000433316 712 ntBASIC4.26□□□□□ -1.73
CTCFP49711 CKS1BP5-201ENST00000434172 273 ntBASIC4.26□□□□□ -1.73
CTCFP49711 RPS25P9-201ENST00000435591 252 ntBASIC4.26□□□□□ -1.73
CTCFP49711 AL008629.1-201ENST00000438615 184 ntBASIC4.26□□□□□ -1.73
CTCFP49711 AC092427.1-201ENST00000439177 601 ntBASIC4.26□□□□□ -1.73
CTCFP49711 MTND1P26-201ENST00000440488 538 ntBASIC4.26□□□□□ -1.73
CTCFP49711 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.26□□□□□ -1.73
CTCFP49711 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.26□□□□□ -1.73
CTCFP49711 RPL39P6-201ENST00000448289 150 ntBASIC4.26□□□□□ -1.73
CTCFP49711 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.26□□□□□ -1.73
CTCFP49711 PABPC1P3-201ENST00000469174 459 ntBASIC4.26□□□□□ -1.73
CTCFP49711 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.26□□□□□ -1.73
CTCFP49711 AC005921.1-201ENST00000510589 286 ntBASIC4.26□□□□□ -1.73
CTCFP49711 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.26□□□□□ -1.73
CTCFP49711 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.26□□□□□ -1.73
CTCFP49711 AC005798.1-201ENST00000513715 387 ntBASIC4.26□□□□□ -1.73
CTCFP49711 RNU6-583P-201ENST00000516012 92 ntBASIC4.26□□□□□ -1.73
CTCFP49711 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.26□□□□□ -1.73
CTCFP49711 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CTCFP49711 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.26□□□□□ -1.73
CTCFP49711 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.26□□□□□ -1.73
CTCFP49711 AL121576.1-201ENST00000556055 276 ntBASIC4.26□□□□□ -1.73
CTCFP49711 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.26□□□□□ -1.73
CTCFP49711 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
CTCFP49711 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.26□□□□□ -1.73
CTCFP49711 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.26□□□□□ -1.73
CTCFP49711 AL353778.1-201ENST00000603149 408 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms