Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 NIFKP8-201ENST00000560500 874 ntBASIC2.99□□□□□ -1.93
TNFSF9P41273 MIR4319-201ENST00000577285 85 ntBASIC2.99□□□□□ -1.93
TNFSF9P41273 BPTFP1-201ENST00000579209 492 ntBASIC2.99□□□□□ -1.93
TNFSF9P41273 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
TNFSF9P41273 AL390838.2-201ENST00000602394 274 ntBASIC2.99□□□□□ -1.93
TNFSF9P41273 AL355812.1-201ENST00000603215 216 ntBASIC2.99□□□□□ -1.93
TNFSF9P41273 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.99□□□□□ -1.93
TNFSF9P41273 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.99□□□□□ -1.93
TNFSF9P41273 AL354696.1-201ENST00000614652 497 ntBASIC2.99□□□□□ -1.93
TNFSF9P41273 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.99□□□□□ -1.93
TNFSF9P41273 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.99□□□□□ -1.93
TNFSF9P41273 AC010338.1-201ENST00000621823 717 ntBASIC2.99□□□□□ -1.93
TNFSF9P41273 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
TNFSF9P41273 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.99□□□□□ -1.93
TNFSF9P41273 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TNFSF9P41273 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.99□□□□□ -1.93
TNFSF9P41273 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
TNFSF9P41273 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.98□□□□□ -1.93
TNFSF9P41273 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.98□□□□□ -1.93
TNFSF9P41273 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.98□□□□□ -1.93
TNFSF9P41273 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
TNFSF9P41273 AC117529.2-201ENST00000512159 2068 ntBASIC2.98□□□□□ -1.93
TNFSF9P41273 MIR449A-201ENST00000362113 91 ntBASIC2.98□□□□□ -1.93
TNFSF9P41273 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
TNFSF9P41273 MIR181B1-201ENST00000385240 110 ntBASIC2.98□□□□□ -1.93
TNFSF9P41273 SNORD65C-201ENST00000390962 71 ntBASIC2.98□□□□□ -1.93
TNFSF9P41273 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
TNFSF9P41273 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.98□□□□□ -1.93
TNFSF9P41273 FNDC3CP-201ENST00000420795 1155 ntBASIC2.98□□□□□ -1.93
TNFSF9P41273 AL049610.1-201ENST00000423374 372 ntBASIC2.98□□□□□ -1.93
TNFSF9P41273 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.98□□□□□ -1.93
TNFSF9P41273 HIGD1AP11-201ENST00000438361 280 ntBASIC2.98□□□□□ -1.93
TNFSF9P41273 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.98□□□□□ -1.93
TNFSF9P41273 AL592437.1-201ENST00000443781 492 ntBASIC2.98□□□□□ -1.93
TNFSF9P41273 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.98□□□□□ -1.93
TNFSF9P41273 KC877373.1-201ENST00000479066 408 ntBASIC2.98□□□□□ -1.93
TNFSF9P41273 AC034159.1-201ENST00000513885 583 ntBASIC2.98□□□□□ -1.93
TNFSF9P41273 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.98□□□□□ -1.93
TNFSF9P41273 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.98□□□□□ -1.93
TNFSF9P41273 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.98□□□□□ -1.93
TNFSF9P41273 AC019227.1-201ENST00000526902 510 ntBASIC2.98□□□□□ -1.93
TNFSF9P41273 AC087276.1-201ENST00000529659 480 ntBASIC2.98□□□□□ -1.93
TNFSF9P41273 AC011611.5-201ENST00000552477 578 ntBASIC2.98□□□□□ -1.93
TNFSF9P41273 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.98□□□□□ -1.93
TNFSF9P41273 AC087481.2-201ENST00000565492 330 ntBASIC2.98□□□□□ -1.93
TNFSF9P41273 HMGB1P6-201ENST00000569046 646 ntBASIC2.98□□□□□ -1.93
TNFSF9P41273 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.98□□□□□ -1.93
TNFSF9P41273 AL109653.1-201ENST00000603091 248 ntBASIC2.98□□□□□ -1.93
TNFSF9P41273 AC128687.1-201ENST00000605304 619 ntBASIC2.98□□□□□ -1.93
TNFSF9P41273 AC007619.2-201ENST00000605743 379 ntBASIC2.98□□□□□ -1.93
TNFSF9P41273 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.98□□□□□ -1.93
TNFSF9P41273 MTND2P41-201ENST00000637599 773 ntBASIC2.98□□□□□ -1.93
TNFSF9P41273 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
TNFSF9P41273 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.98□□□□□ -1.93
TNFSF9P41273 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TNFSF9P41273 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TNFSF9P41273 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
TNFSF9P41273 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.97□□□□□ -1.93
TNFSF9P41273 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TNFSF9P41273 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.97□□□□□ -1.93
TNFSF9P41273 AL360182.1-201ENST00000397433 468 ntBASIC2.97□□□□□ -1.93
TNFSF9P41273 MTND4LP20-201ENST00000402379 270 ntBASIC2.97□□□□□ -1.93
TNFSF9P41273 AL356057.3-201ENST00000402607 340 ntBASIC2.97□□□□□ -1.93
TNFSF9P41273 OR51A3P-201ENST00000413596 924 ntBASIC2.97□□□□□ -1.93
TNFSF9P41273 YPEL5P1-201ENST00000419731 367 ntBASIC2.97□□□□□ -1.93
TNFSF9P41273 AC006548.1-201ENST00000427470 102 ntBASIC2.97□□□□□ -1.93
TNFSF9P41273 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.97□□□□□ -1.93
TNFSF9P41273 AC112220.1-201ENST00000434628 355 ntBASIC2.97□□□□□ -1.93
TNFSF9P41273 HMGN2P20-201ENST00000437531 273 ntBASIC2.97□□□□□ -1.93
TNFSF9P41273 HSFY3P-201ENST00000444242 1191 ntBASIC2.97□□□□□ -1.93
TNFSF9P41273 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.97□□□□□ -1.93
TNFSF9P41273 RPL7P59-201ENST00000447700 943 ntBASIC2.97□□□□□ -1.93
TNFSF9P41273 AL096803.2-201ENST00000450032 677 ntBASIC2.97□□□□□ -1.93
TNFSF9P41273 ARPC3P2-201ENST00000457786 533 ntBASIC2.97□□□□□ -1.93
TNFSF9P41273 NAP1L1P3-201ENST00000462291 880 ntBASIC2.97□□□□□ -1.93
TNFSF9P41273 AC010301.1-201ENST00000473936 355 ntBASIC2.97□□□□□ -1.93
TNFSF9P41273 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.97□□□□□ -1.93
TNFSF9P41273 PRELID3BP4-201ENST00000515476 571 ntBASIC2.97□□□□□ -1.93
TNFSF9P41273 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC2.97□□□□□ -1.93
TNFSF9P41273 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.97□□□□□ -1.93
TNFSF9P41273 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC2.97□□□□□ -1.93
TNFSF9P41273 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TNFSF9P41273 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
TNFSF9P41273 LSM6P2-201ENST00000552208 177 ntBASIC2.97□□□□□ -1.93
TNFSF9P41273 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC2.97□□□□□ -1.93
TNFSF9P41273 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.97□□□□□ -1.93
TNFSF9P41273 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.97□□□□□ -1.93
TNFSF9P41273 AC073968.1-201ENST00000618594 637 ntBASIC2.97□□□□□ -1.93
TNFSF9P41273 AL445493.3-201ENST00000619568 477 ntBASIC2.97□□□□□ -1.93
TNFSF9P41273 AC092650.2-201ENST00000619984 902 ntBASIC2.97□□□□□ -1.93
TNFSF9P41273 AP003485.2-201ENST00000623636 610 ntBASIC2.97□□□□□ -1.93
TNFSF9P41273 CR381572.1-201ENST00000625098 102 ntBASIC2.97□□□□□ -1.93
TNFSF9P41273 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
TNFSF9P41273 AC062016.1-201ENST00000355719 319 ntBASIC2.96□□□□□ -1.94
TNFSF9P41273 NACA3P-201ENST00000359690 648 ntBASIC2.96□□□□□ -1.94
TNFSF9P41273 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
TNFSF9P41273 RNA5SP21-201ENST00000410917 96 ntBASIC2.96□□□□□ -1.94
TNFSF9P41273 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.96□□□□□ -1.94
TNFSF9P41273 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
TNFSF9P41273 AL139281.1-201ENST00000422120 335 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms