Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.37□□□□□ -1.87
SOX3P41225 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
SOX3P41225 NDUFB9P3-201ENST00000521269 501 ntBASIC3.37□□□□□ -1.87
SOX3P41225 IGKV2D-19-201ENST00000523346 262 ntBASIC3.37□□□□□ -1.87
SOX3P41225 AC239860.2-201ENST00000525886 270 ntBASIC3.37□□□□□ -1.87
SOX3P41225 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.37□□□□□ -1.87
SOX3P41225 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SOX3P41225 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.37□□□□□ -1.87
SOX3P41225 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SOX3P41225 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.37□□□□□ -1.87
SOX3P41225 MIR4425-201ENST00000580572 84 ntBASIC3.37□□□□□ -1.87
SOX3P41225 AL355812.1-201ENST00000603215 216 ntBASIC3.37□□□□□ -1.87
SOX3P41225 AC083899.3-201ENST00000603413 594 ntBASIC3.37□□□□□ -1.87
SOX3P41225 AL365503.1-201ENST00000605247 905 ntBASIC3.37□□□□□ -1.87
SOX3P41225 RNU6-88P-201ENST00000606801 100 ntBASIC3.37□□□□□ -1.87
SOX3P41225 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.37□□□□□ -1.87
SOX3P41225 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SOX3P41225 AL031667.3-201ENST00000620124 655 ntBASIC3.37□□□□□ -1.87
SOX3P41225 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SOX3P41225 AC009093.8-201ENST00000641769 292 ntBASIC3.37□□□□□ -1.87
SOX3P41225 EXOC5P1-201ENST00000510543 1969 ntBASIC3.37□□□□□ -1.87
SOX3P41225 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SOX3P41225 MAPK10-372ENST00000641954 3413 ntBASIC3.37□□□□□ -1.87
SOX3P41225 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.37□□□□□ -1.87
SOX3P41225 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
SOX3P41225 AC011477.1-204ENST00000623416 1325 ntBASIC3.37□□□□□ -1.87
SOX3P41225 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
SOX3P41225 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SOX3P41225 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.36□□□□□ -1.87
SOX3P41225 AC087359.1-201ENST00000508335 1740 ntBASIC3.36□□□□□ -1.87
SOX3P41225 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SOX3P41225 RIOK3P1-201ENST00000418778 1528 ntBASIC3.36□□□□□ -1.87
SOX3P41225 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
SOX3P41225 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SOX3P41225 RNU6-462P-201ENST00000362659 105 ntBASIC3.36□□□□□ -1.87
SOX3P41225 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SOX3P41225 RNU6-339P-201ENST00000384310 107 ntBASIC3.36□□□□□ -1.87
SOX3P41225 RNU6-878P-201ENST00000384578 110 ntBASIC3.36□□□□□ -1.87
SOX3P41225 RNU6-253P-201ENST00000384730 105 ntBASIC3.36□□□□□ -1.87
SOX3P41225 MIR124-3-201ENST00000384866 87 ntBASIC3.36□□□□□ -1.87
SOX3P41225 AL121972.1-201ENST00000402023 252 ntBASIC3.36□□□□□ -1.87
SOX3P41225 AL136116.1-201ENST00000403591 381 ntBASIC3.36□□□□□ -1.87
SOX3P41225 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.36□□□□□ -1.87
SOX3P41225 TPMTP2-201ENST00000414372 726 ntBASIC3.36□□□□□ -1.87
SOX3P41225 RPS29P4-201ENST00000414733 161 ntBASIC3.36□□□□□ -1.87
SOX3P41225 FNDC3CP-201ENST00000420795 1155 ntBASIC3.36□□□□□ -1.87
SOX3P41225 RPL7P30-201ENST00000420888 709 ntBASIC3.36□□□□□ -1.87
SOX3P41225 AC245054.1-201ENST00000420944 258 ntBASIC3.36□□□□□ -1.87
SOX3P41225 MTND1P20-201ENST00000430341 950 ntBASIC3.36□□□□□ -1.87
SOX3P41225 HMGN2P31-201ENST00000432430 273 ntBASIC3.36□□□□□ -1.87
SOX3P41225 CKS1BP5-201ENST00000434172 273 ntBASIC3.36□□□□□ -1.87
SOX3P41225 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.36□□□□□ -1.87
SOX3P41225 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.36□□□□□ -1.87
SOX3P41225 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.36□□□□□ -1.87
SOX3P41225 EEF1E1P1-201ENST00000446998 430 ntBASIC3.36□□□□□ -1.87
SOX3P41225 AC010655.1-201ENST00000449336 292 ntBASIC3.36□□□□□ -1.87
SOX3P41225 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.36□□□□□ -1.87
SOX3P41225 BZW1P2-201ENST00000473537 826 ntBASIC3.36□□□□□ -1.87
SOX3P41225 AC106707.2-201ENST00000484182 374 ntBASIC3.36□□□□□ -1.87
SOX3P41225 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.36□□□□□ -1.87
SOX3P41225 AC112198.1-201ENST00000505369 1220 ntBASIC3.36□□□□□ -1.87
SOX3P41225 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.36□□□□□ -1.87
SOX3P41225 AC010486.3-201ENST00000511602 785 ntBASIC3.36□□□□□ -1.87
SOX3P41225 ARL2BPP6-201ENST00000512757 439 ntBASIC3.36□□□□□ -1.87
SOX3P41225 AC118465.1-201ENST00000513820 1271 ntBASIC3.36□□□□□ -1.87
SOX3P41225 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.36□□□□□ -1.87
SOX3P41225 SNORA70.14-201ENST00000516205 110 ntBASIC3.36□□□□□ -1.87
SOX3P41225 RNU6-150P-201ENST00000516237 95 ntBASIC3.36□□□□□ -1.87
SOX3P41225 MTCO1P47-201ENST00000523889 1271 ntBASIC3.36□□□□□ -1.87
SOX3P41225 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.36□□□□□ -1.87
SOX3P41225 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.36□□□□□ -1.87
SOX3P41225 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.36□□□□□ -1.87
SOX3P41225 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.36□□□□□ -1.87
SOX3P41225 AC074050.1-201ENST00000563247 211 ntBASIC3.36□□□□□ -1.87
SOX3P41225 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.36□□□□□ -1.87
SOX3P41225 AL109653.1-201ENST00000603091 248 ntBASIC3.36□□□□□ -1.87
SOX3P41225 AC097065.2-201ENST00000608159 533 ntBASIC3.36□□□□□ -1.87
SOX3P41225 AC004223.4-201ENST00000612426 332 ntBASIC3.36□□□□□ -1.87
SOX3P41225 AC122133.1-201ENST00000613964 233 ntBASIC3.36□□□□□ -1.87
SOX3P41225 MIR6075-201ENST00000620782 95 ntBASIC3.36□□□□□ -1.87
SOX3P41225 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.36□□□□□ -1.87
SOX3P41225 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SOX3P41225 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.36□□□□□ -1.87
SOX3P41225 AC007823.1-201ENST00000569932 1566 ntBASIC3.36□□□□□ -1.87
SOX3P41225 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SOX3P41225 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SOX3P41225 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SOX3P41225 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.35□□□□□ -1.87
SOX3P41225 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SOX3P41225 Y_RNA.18-201ENST00000362461 102 ntBASIC3.35□□□□□ -1.87
SOX3P41225 SNORD9-201ENST00000362566 104 ntBASIC3.35□□□□□ -1.87
SOX3P41225 RNU6-553P-201ENST00000364047 96 ntBASIC3.35□□□□□ -1.87
SOX3P41225 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.35□□□□□ -1.87
SOX3P41225 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SOX3P41225 RNU6-952P-201ENST00000391164 108 ntBASIC3.35□□□□□ -1.87
SOX3P41225 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SOX3P41225 RNA5SP56-201ENST00000410277 118 ntBASIC3.35□□□□□ -1.87
SOX3P41225 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SOX3P41225 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.35□□□□□ -1.87
SOX3P41225 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms