Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.09□□□□□ -1.75
HOXA11P31270 OR6C5P-201ENST00000452388 923 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 SSXP1-201ENST00000453640 473 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXA11P31270 AC126182.1-201ENST00000478134 357 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 AC106707.2-201ENST00000484182 374 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 RNU6-1261P-201ENST00000517194 104 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 NRON-201ENST00000517270 370 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXA11P31270 HIGD1AP6-201ENST00000521833 279 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.09□□□□□ -1.75
HOXA11P31270 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXA11P31270 AL139174.1-201ENST00000531489 886 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.09□□□□□ -1.75
HOXA11P31270 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.09□□□□□ -1.75
HOXA11P31270 TRAV15-201ENST00000556680 249 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.09□□□□□ -1.75
HOXA11P31270 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXA11P31270 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXA11P31270 AC136618.2-201ENST00000575091 400 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 AC090616.5-202ENST00000582111 297 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 AC010928.3-201ENST00000587712 541 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.09□□□□□ -1.75
HOXA11P31270 AC008739.3-201ENST00000603262 127 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 AL390816.3-201ENST00000604527 1066 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 AL137849.1-201ENST00000604767 169 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 AC138749.5-201ENST00000611461 208 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 AC095031.1-201ENST00000623685 672 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 AC025048.6-202ENST00000627667 438 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 AC026634.1-201ENST00000634369 198 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 AC107982.1-201ENST00000507171 1300 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HOXA11P31270 CDR1-202ENST00000625883 1485 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.09□□□□□ -1.76
HOXA11P31270 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.09□□□□□ -1.76
HOXA11P31270 EXOC5P1-201ENST00000510543 1969 ntBASIC4.09□□□□□ -1.76
HOXA11P31270 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXA11P31270 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXA11P31270 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
HOXA11P31270 RNU6-582P-201ENST00000362989 107 ntBASIC4.08□□□□□ -1.76
HOXA11P31270 RNU6-1283P-201ENST00000365314 105 ntBASIC4.08□□□□□ -1.76
HOXA11P31270 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXA11P31270 RNY3P10-201ENST00000384764 102 ntBASIC4.08□□□□□ -1.76
HOXA11P31270 MIR506-201ENST00000384998 124 ntBASIC4.08□□□□□ -1.76
HOXA11P31270 DSTNP4-201ENST00000399472 474 ntBASIC4.08□□□□□ -1.76
HOXA11P31270 MIR1284-201ENST00000408337 120 ntBASIC4.08□□□□□ -1.76
HOXA11P31270 RNA5SP306-201ENST00000411087 107 ntBASIC4.08□□□□□ -1.76
HOXA11P31270 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXA11P31270 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXA11P31270 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXA11P31270 EI24P1-201ENST00000416584 867 ntBASIC4.08□□□□□ -1.76
HOXA11P31270 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HOXA11P31270 KPNA2P2-201ENST00000419546 1489 ntBASIC4.08□□□□□ -1.76
HOXA11P31270 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HOXA11P31270 MTND4LP11-201ENST00000422184 280 ntBASIC4.08□□□□□ -1.76
HOXA11P31270 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.08□□□□□ -1.76
HOXA11P31270 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXA11P31270 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXA11P31270 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXA11P31270 DNAJC19P4-201ENST00000440115 345 ntBASIC4.08□□□□□ -1.76
HOXA11P31270 MTATP6P23-201ENST00000440153 476 ntBASIC4.08□□□□□ -1.76
HOXA11P31270 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXA11P31270 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXA11P31270 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXA11P31270 RPS26P56-201ENST00000444468 240 ntBASIC4.08□□□□□ -1.76
HOXA11P31270 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.08□□□□□ -1.76
HOXA11P31270 AL451050.1-201ENST00000450126 415 ntBASIC4.08□□□□□ -1.76
HOXA11P31270 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.08□□□□□ -1.76
HOXA11P31270 AC010307.1-201ENST00000467206 836 ntBASIC4.08□□□□□ -1.76
HOXA11P31270 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXA11P31270 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXA11P31270 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXA11P31270 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXA11P31270 AC104619.4-201ENST00000510773 249 ntBASIC4.08□□□□□ -1.76
HOXA11P31270 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
HOXA11P31270 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HOXA11P31270 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXA11P31270 RNU6-488P-201ENST00000515918 99 ntBASIC4.08□□□□□ -1.76
HOXA11P31270 RNU6-885P-201ENST00000516607 104 ntBASIC4.08□□□□□ -1.76
HOXA11P31270 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXA11P31270 AP001189.2-201ENST00000527320 189 ntBASIC4.08□□□□□ -1.76
HOXA11P31270 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXA11P31270 AC087276.1-201ENST00000529659 480 ntBASIC4.08□□□□□ -1.76
HOXA11P31270 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXA11P31270 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXA11P31270 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.08□□□□□ -1.76
HOXA11P31270 AC136619.2-201ENST00000563361 631 ntBASIC4.08□□□□□ -1.76
HOXA11P31270 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
HOXA11P31270 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXA11P31270 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXA11P31270 AC017100.2-201ENST00000584628 355 ntBASIC4.08□□□□□ -1.76
HOXA11P31270 YWHAQP7-201ENST00000603536 658 ntBASIC4.08□□□□□ -1.76
HOXA11P31270 AC090186.1-201ENST00000605991 572 ntBASIC4.08□□□□□ -1.76
HOXA11P31270 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.08□□□□□ -1.76
HOXA11P31270 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HOXA11P31270 AC119674.1-207ENST00000641355 633 ntBASIC4.08□□□□□ -1.76
HOXA11P31270 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HOXA11P31270 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXA11P31270 MAPK10-253ENST00000641010 4072 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms