Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 CRYM-AS1-204ENST00000637983 556 ntBASIC2.43□□□□□ -2.02
COL5A1P20908 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.43□□□□□ -2.02
COL5A1P20908 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
COL5A1P20908 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
COL5A1P20908 AC117529.2-201ENST00000512159 2068 ntBASIC2.43□□□□□ -2.02
COL5A1P20908 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.43□□□□□ -2.02
COL5A1P20908 AC006020.1-201ENST00000420179 1854 ntBASIC2.43□□□□□ -2.02
COL5A1P20908 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
COL5A1P20908 PHKBP1-201ENST00000450951 1951 ntBASIC2.43□□□□□ -2.02
COL5A1P20908 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
COL5A1P20908 AL445437.1-201ENST00000623157 3087 ntBASIC2.42□□□□□ -2.02
COL5A1P20908 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
COL5A1P20908 MIR421-201ENST00000365696 85 ntBASIC2.42□□□□□ -2.02
COL5A1P20908 RN7SKP123-201ENST00000410732 291 ntBASIC2.42□□□□□ -2.02
COL5A1P20908 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.42□□□□□ -2.02
COL5A1P20908 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
COL5A1P20908 SFR1P2-201ENST00000421841 730 ntBASIC2.42□□□□□ -2.02
COL5A1P20908 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.42□□□□□ -2.02
COL5A1P20908 AC078857.1-201ENST00000469870 667 ntBASIC2.42□□□□□ -2.02
COL5A1P20908 RN7SL499P-201ENST00000481141 276 ntBASIC2.42□□□□□ -2.02
COL5A1P20908 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.42□□□□□ -2.02
COL5A1P20908 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.42□□□□□ -2.02
COL5A1P20908 MIR1273D-201ENST00000577266 86 ntBASIC2.42□□□□□ -2.02
COL5A1P20908 AC242628.1-201ENST00000606810 391 ntBASIC2.42□□□□□ -2.02
COL5A1P20908 AC090772.4-201ENST00000623599 362 ntBASIC2.42□□□□□ -2.02
COL5A1P20908 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
COL5A1P20908 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
COL5A1P20908 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
COL5A1P20908 CR382285.2-201ENST00000624662 1495 ntBASIC2.42□□□□□ -2.02
COL5A1P20908 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
COL5A1P20908 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
COL5A1P20908 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
COL5A1P20908 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
COL5A1P20908 SNORA25.6-201ENST00000364121 118 ntBASIC2.42□□□□□ -2.02
COL5A1P20908 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
COL5A1P20908 MIR1287-201ENST00000408492 90 ntBASIC2.42□□□□□ -2.02
COL5A1P20908 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
COL5A1P20908 AC073310.1-201ENST00000423226 1033 ntBASIC2.42□□□□□ -2.02
COL5A1P20908 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.42□□□□□ -2.02
COL5A1P20908 UBE2D3P3-201ENST00000426992 425 ntBASIC2.42□□□□□ -2.02
COL5A1P20908 RPL31P20-201ENST00000449593 360 ntBASIC2.42□□□□□ -2.02
COL5A1P20908 AP000926.1-201ENST00000479573 241 ntBASIC2.42□□□□□ -2.02
COL5A1P20908 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.42□□□□□ -2.02
COL5A1P20908 AC092185.1-201ENST00000491371 97 ntBASIC2.42□□□□□ -2.02
COL5A1P20908 MTCO2P9-201ENST00000503214 694 ntBASIC2.42□□□□□ -2.02
COL5A1P20908 AC234781.5-201ENST00000508429 271 ntBASIC2.42□□□□□ -2.02
COL5A1P20908 RN7SKP34-201ENST00000516142 244 ntBASIC2.42□□□□□ -2.02
COL5A1P20908 RN7SKP282-201ENST00000516824 299 ntBASIC2.42□□□□□ -2.02
COL5A1P20908 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.42□□□□□ -2.02
COL5A1P20908 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.42□□□□□ -2.02
COL5A1P20908 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.42□□□□□ -2.02
COL5A1P20908 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.42□□□□□ -2.02
COL5A1P20908 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC2.42□□□□□ -2.02
COL5A1P20908 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.42□□□□□ -2.02
COL5A1P20908 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.42□□□□□ -2.02
COL5A1P20908 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC2.42□□□□□ -2.02
COL5A1P20908 MIR5092-201ENST00000583139 88 ntBASIC2.42□□□□□ -2.02
COL5A1P20908 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.42□□□□□ -2.02
COL5A1P20908 AC120053.1-201ENST00000607706 736 ntBASIC2.42□□□□□ -2.02
COL5A1P20908 AC018645.2-201ENST00000609151 472 ntBASIC2.42□□□□□ -2.02
COL5A1P20908 AL592494.3-201ENST00000609485 464 ntBASIC2.42□□□□□ -2.02
COL5A1P20908 AC004696.1-201ENST00000614345 607 ntBASIC2.42□□□□□ -2.02
COL5A1P20908 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.42□□□□□ -2.02
COL5A1P20908 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
COL5A1P20908 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
COL5A1P20908 AC092326.2-201ENST00000624772 1561 ntBASIC2.41□□□□□ -2.02
COL5A1P20908 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
COL5A1P20908 AL136964.1-201ENST00000622038 2990 ntBASIC2.41□□□□□ -2.02
COL5A1P20908 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.41□□□□□ -2.02
COL5A1P20908 Y_RNA.338-201ENST00000365320 114 ntBASIC2.41□□□□□ -2.02
COL5A1P20908 TRAPPC2P10-201ENST00000415662 323 ntBASIC2.41□□□□□ -2.02
COL5A1P20908 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC2.41□□□□□ -2.02
COL5A1P20908 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.41□□□□□ -2.02
COL5A1P20908 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.41□□□□□ -2.02
COL5A1P20908 AC104629.2-201ENST00000468627 598 ntBASIC2.41□□□□□ -2.02
COL5A1P20908 AL049830.2-201ENST00000480072 201 ntBASIC2.41□□□□□ -2.02
COL5A1P20908 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.41□□□□□ -2.02
COL5A1P20908 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.41□□□□□ -2.02
COL5A1P20908 OSBPL9P3-201ENST00000534523 595 ntBASIC2.41□□□□□ -2.02
COL5A1P20908 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.41□□□□□ -2.02
COL5A1P20908 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.41□□□□□ -2.02
COL5A1P20908 OR4H12P-201ENST00000556269 907 ntBASIC2.41□□□□□ -2.02
COL5A1P20908 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC2.41□□□□□ -2.02
COL5A1P20908 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.41□□□□□ -2.02
COL5A1P20908 AC004775.1-201ENST00000607389 753 ntBASIC2.41□□□□□ -2.02
COL5A1P20908 AC097504.2-201ENST00000608088 454 ntBASIC2.41□□□□□ -2.02
COL5A1P20908 AC107294.3-201ENST00000609211 526 ntBASIC2.41□□□□□ -2.02
COL5A1P20908 AC022960.3-201ENST00000619794 441 ntBASIC2.41□□□□□ -2.02
COL5A1P20908 AC110994.2-201ENST00000635481 492 ntBASIC2.41□□□□□ -2.02
COL5A1P20908 AL445984.1-201ENST00000637834 659 ntBASIC2.41□□□□□ -2.02
COL5A1P20908 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.41□□□□□ -2.02
COL5A1P20908 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
COL5A1P20908 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
COL5A1P20908 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.41□□□□□ -2.02
COL5A1P20908 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
COL5A1P20908 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
COL5A1P20908 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.4□□□□□ -2.02
COL5A1P20908 Y_RNA.140-201ENST00000363474 103 ntBASIC2.4□□□□□ -2.02
COL5A1P20908 Y_RNA.466-201ENST00000384294 113 ntBASIC2.4□□□□□ -2.02
COL5A1P20908 Y_RNA.595-201ENST00000410403 105 ntBASIC2.4□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms