Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC006557.5-201ENST00000603126 811 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 AC013444.2-201ENST00000603317 787 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 AC069304.2-201ENST00000605154 435 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 AL034351.1-201ENST00000605288 668 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.49□□□□□ -1.85
HLA-DPA1P20036 AC097504.2-201ENST00000608088 454 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 AC099778.2-201ENST00000610904 211 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 AL158163.2-201ENST00000619110 700 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 AC243312.2-201ENST00000623340 601 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.49□□□□□ -1.85
HLA-DPA1P20036 SNORA50A-202ENST00000629536 136 ntBASIC3.49□□□□□ -1.85
HLA-DPA1P20036 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.49□□□□□ -1.85
HLA-DPA1P20036 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DPA1P20036 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
HLA-DPA1P20036 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DPA1P20036 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.48□□□□□ -1.85
HLA-DPA1P20036 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.48□□□□□ -1.85
HLA-DPA1P20036 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DPA1P20036 SNORA71.3-201ENST00000362582 128 ntBASIC3.48□□□□□ -1.85
HLA-DPA1P20036 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DPA1P20036 RNU6-1122P-201ENST00000384449 107 ntBASIC3.48□□□□□ -1.85
HLA-DPA1P20036 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
HLA-DPA1P20036 DHFRP6-201ENST00000401776 268 ntBASIC3.48□□□□□ -1.85
HLA-DPA1P20036 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DPA1P20036 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.48□□□□□ -1.85
HLA-DPA1P20036 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DPA1P20036 AC073063.1-201ENST00000434352 607 ntBASIC3.48□□□□□ -1.85
HLA-DPA1P20036 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DPA1P20036 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DPA1P20036 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DPA1P20036 TRGVB-201ENST00000453257 471 ntBASIC3.48□□□□□ -1.85
HLA-DPA1P20036 AC104982.1-201ENST00000478775 574 ntBASIC3.48□□□□□ -1.85
HLA-DPA1P20036 RPL30P14-201ENST00000482744 348 ntBASIC3.48□□□□□ -1.85
HLA-DPA1P20036 AC108860.1-201ENST00000484521 383 ntBASIC3.48□□□□□ -1.85
HLA-DPA1P20036 AC114981.1-201ENST00000503897 678 ntBASIC3.48□□□□□ -1.85
HLA-DPA1P20036 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.48□□□□□ -1.85
HLA-DPA1P20036 MIR4425-201ENST00000580572 84 ntBASIC3.48□□□□□ -1.85
HLA-DPA1P20036 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DPA1P20036 VN1R83P-201ENST00000595685 445 ntBASIC3.48□□□□□ -1.85
HLA-DPA1P20036 AL133393.1-201ENST00000603277 287 ntBASIC3.48□□□□□ -1.85
HLA-DPA1P20036 BNIP3P11-201ENST00000603878 563 ntBASIC3.48□□□□□ -1.85
HLA-DPA1P20036 AL365503.1-201ENST00000605247 905 ntBASIC3.48□□□□□ -1.85
HLA-DPA1P20036 AC104763.3-201ENST00000613765 618 ntBASIC3.48□□□□□ -1.85
HLA-DPA1P20036 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DPA1P20036 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DPA1P20036 AL513302.2-201ENST00000562313 1842 ntBASIC3.48□□□□□ -1.85
HLA-DPA1P20036 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
HLA-DPA1P20036 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DPA1P20036 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DPA1P20036 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DPA1P20036 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DPA1P20036 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
HLA-DPA1P20036 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
HLA-DPA1P20036 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.47□□□□□ -1.85
HLA-DPA1P20036 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DPA1P20036 AC058791.1-201ENST00000608412 3198 ntBASIC3.47□□□□□ -1.85
HLA-DPA1P20036 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DPA1P20036 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.47□□□□□ -1.85
HLA-DPA1P20036 MIR7-3-201ENST00000384898 110 ntBASIC3.47□□□□□ -1.85
HLA-DPA1P20036 RNU2-43P-201ENST00000410306 190 ntBASIC3.47□□□□□ -1.85
HLA-DPA1P20036 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.47□□□□□ -1.85
HLA-DPA1P20036 TMEM167AP1-201ENST00000423409 219 ntBASIC3.47□□□□□ -1.85
HLA-DPA1P20036 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.47□□□□□ -1.85
HLA-DPA1P20036 YME1L1P1-201ENST00000429435 297 ntBASIC3.47□□□□□ -1.85
HLA-DPA1P20036 AC024082.2-201ENST00000434771 238 ntBASIC3.47□□□□□ -1.85
HLA-DPA1P20036 AL358232.1-201ENST00000448030 501 ntBASIC3.47□□□□□ -1.85
HLA-DPA1P20036 AL590664.1-201ENST00000448065 339 ntBASIC3.47□□□□□ -1.85
HLA-DPA1P20036 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.47□□□□□ -1.85
HLA-DPA1P20036 RPS4XP2-201ENST00000458402 793 ntBASIC3.47□□□□□ -1.85
HLA-DPA1P20036 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DPA1P20036 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.47□□□□□ -1.85
HLA-DPA1P20036 MTCYBP17-201ENST00000503579 789 ntBASIC3.47□□□□□ -1.85
HLA-DPA1P20036 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.47□□□□□ -1.85
HLA-DPA1P20036 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.47□□□□□ -1.85
HLA-DPA1P20036 AC114322.1-201ENST00000506771 926 ntBASIC3.47□□□□□ -1.85
HLA-DPA1P20036 AC110768.1-201ENST00000509222 400 ntBASIC3.47□□□□□ -1.85
HLA-DPA1P20036 RN7SKP60-201ENST00000516985 239 ntBASIC3.47□□□□□ -1.85
HLA-DPA1P20036 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.47□□□□□ -1.85
HLA-DPA1P20036 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.47□□□□□ -1.85
HLA-DPA1P20036 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.47□□□□□ -1.85
HLA-DPA1P20036 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.47□□□□□ -1.85
HLA-DPA1P20036 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.47□□□□□ -1.85
HLA-DPA1P20036 AC074050.1-201ENST00000563247 211 ntBASIC3.47□□□□□ -1.85
HLA-DPA1P20036 RN7SL339P-201ENST00000580597 296 ntBASIC3.47□□□□□ -1.85
HLA-DPA1P20036 CCDC58P3-201ENST00000590792 430 ntBASIC3.47□□□□□ -1.85
HLA-DPA1P20036 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.47□□□□□ -1.85
HLA-DPA1P20036 AC106791.2-201ENST00000604680 391 ntBASIC3.47□□□□□ -1.85
HLA-DPA1P20036 AC004853.1-201ENST00000604902 698 ntBASIC3.47□□□□□ -1.85
HLA-DPA1P20036 AC092354.2-201ENST00000607786 514 ntBASIC3.47□□□□□ -1.85
HLA-DPA1P20036 DUXAP10-204ENST00000612052 616 ntBASIC3.47□□□□□ -1.85
HLA-DPA1P20036 AC244258.1-201ENST00000637553 1071 ntBASIC3.47□□□□□ -1.85
HLA-DPA1P20036 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DPA1P20036 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DPA1P20036 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
HLA-DPA1P20036 AC009812.4-201ENST00000569134 1805 ntBASIC3.47□□□□□ -1.85
HLA-DPA1P20036 AC011460.1-201ENST00000636268 1834 ntBASIC3.47□□□□□ -1.85
HLA-DPA1P20036 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
HLA-DPA1P20036 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.46□□□□□ -1.85
HLA-DPA1P20036 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms