Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL6A2P12110 ZNF734P-201ENST00000419494 1534 ntBASIC4.81□□□□□ -1.64
COL6A2P12110 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL6A2P12110 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL6A2P12110 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL6A2P12110 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL6A2P12110 DHX40P1-201ENST00000588725 1412 ntBASIC4.8□□□□□ -1.64
COL6A2P12110 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.8□□□□□ -1.64
COL6A2P12110 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL6A2P12110 OR4G1P-203ENST00000641984 1631 ntBASIC4.8□□□□□ -1.64
COL6A2P12110 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
COL6A2P12110 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL6A2P12110 OR14L1P-202ENST00000641545 3009 ntBASIC4.8□□□□□ -1.64
COL6A2P12110 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
COL6A2P12110 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL6A2P12110 NACAP2-201ENST00000318548 624 ntBASIC4.8□□□□□ -1.64
COL6A2P12110 HSPE1P11-201ENST00000339579 310 ntBASIC4.8□□□□□ -1.64
COL6A2P12110 Y_RNA.367-201ENST00000365544 101 ntBASIC4.8□□□□□ -1.64
COL6A2P12110 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL6A2P12110 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL6A2P12110 RNU6-39P-201ENST00000384344 107 ntBASIC4.8□□□□□ -1.64
COL6A2P12110 MIR454-201ENST00000390180 115 ntBASIC4.8□□□□□ -1.64
COL6A2P12110 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.8□□□□□ -1.64
COL6A2P12110 MIR1286-201ENST00000408112 78 ntBASIC4.8□□□□□ -1.64
COL6A2P12110 U3.36-201ENST00000408418 213 ntBASIC4.8□□□□□ -1.64
COL6A2P12110 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.8□□□□□ -1.64
COL6A2P12110 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.8□□□□□ -1.64
COL6A2P12110 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.8□□□□□ -1.64
COL6A2P12110 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL6A2P12110 GEMIN8P3-201ENST00000445417 720 ntBASIC4.8□□□□□ -1.64
COL6A2P12110 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.8□□□□□ -1.64
COL6A2P12110 AC073587.1-201ENST00000447093 876 ntBASIC4.8□□□□□ -1.64
COL6A2P12110 AL162388.1-201ENST00000450912 352 ntBASIC4.8□□□□□ -1.64
COL6A2P12110 RNU7-59P-201ENST00000459101 61 ntBASIC4.8□□□□□ -1.64
COL6A2P12110 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL6A2P12110 EIF4EP3-201ENST00000498782 656 ntBASIC4.8□□□□□ -1.64
COL6A2P12110 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL6A2P12110 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.8□□□□□ -1.64
COL6A2P12110 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.8□□□□□ -1.64
COL6A2P12110 MTCO3P44-201ENST00000510977 541 ntBASIC4.8□□□□□ -1.64
COL6A2P12110 SNORA19.2-201ENST00000516013 114 ntBASIC4.8□□□□□ -1.64
COL6A2P12110 AC105029.1-201ENST00000520250 669 ntBASIC4.8□□□□□ -1.64
COL6A2P12110 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.8□□□□□ -1.64
COL6A2P12110 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.8□□□□□ -1.64
COL6A2P12110 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.8□□□□□ -1.64
COL6A2P12110 AC011611.1-201ENST00000552179 197 ntBASIC4.8□□□□□ -1.64
COL6A2P12110 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.8□□□□□ -1.64
COL6A2P12110 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL6A2P12110 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.8□□□□□ -1.64
COL6A2P12110 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.8□□□□□ -1.64
COL6A2P12110 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.8□□□□□ -1.64
COL6A2P12110 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.8□□□□□ -1.64
COL6A2P12110 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.8□□□□□ -1.64
COL6A2P12110 uc_338.18-201ENST00000615451 175 ntBASIC4.8□□□□□ -1.64
COL6A2P12110 AC244100.1-202ENST00000621554 382 ntBASIC4.8□□□□□ -1.64
COL6A2P12110 CR381572.2-201ENST00000624852 397 ntBASIC4.8□□□□□ -1.64
COL6A2P12110 AC091925.2-201ENST00000625059 256 ntBASIC4.8□□□□□ -1.64
COL6A2P12110 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL6A2P12110 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.8□□□□□ -1.64
COL6A2P12110 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL6A2P12110 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.8□□□□□ -1.64
COL6A2P12110 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL6A2P12110 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
COL6A2P12110 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.8□□□□□ -1.64
COL6A2P12110 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.8□□□□□ -1.64
COL6A2P12110 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL6A2P12110 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL6A2P12110 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
COL6A2P12110 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL6A2P12110 AL445487.1-201ENST00000415694 1580 ntBASIC4.79□□□□□ -1.64
COL6A2P12110 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.79□□□□□ -1.64
COL6A2P12110 AL359893.1-201ENST00000447628 1580 ntBASIC4.79□□□□□ -1.64
COL6A2P12110 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL6A2P12110 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL6A2P12110 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL6A2P12110 RNU6-511P-201ENST00000363496 107 ntBASIC4.79□□□□□ -1.64
COL6A2P12110 RNU5E-8P-201ENST00000363502 116 ntBASIC4.79□□□□□ -1.64
COL6A2P12110 RNU6-278P-201ENST00000390945 109 ntBASIC4.79□□□□□ -1.64
COL6A2P12110 TBCAP2-201ENST00000416175 326 ntBASIC4.79□□□□□ -1.64
COL6A2P12110 AC009161.1-201ENST00000417306 376 ntBASIC4.79□□□□□ -1.64
COL6A2P12110 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.79□□□□□ -1.64
COL6A2P12110 MED13P1-201ENST00000428342 171 ntBASIC4.79□□□□□ -1.64
COL6A2P12110 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.79□□□□□ -1.64
COL6A2P12110 AC007677.1-201ENST00000445757 515 ntBASIC4.79□□□□□ -1.64
COL6A2P12110 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.79□□□□□ -1.64
COL6A2P12110 BX276092.4-201ENST00000452056 248 ntBASIC4.79□□□□□ -1.64
COL6A2P12110 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.79□□□□□ -1.64
COL6A2P12110 AC126389.1-201ENST00000477436 290 ntBASIC4.79□□□□□ -1.64
COL6A2P12110 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.79□□□□□ -1.64
COL6A2P12110 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.79□□□□□ -1.64
COL6A2P12110 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.79□□□□□ -1.64
COL6A2P12110 RNU2-10P-201ENST00000516375 211 ntBASIC4.79□□□□□ -1.64
COL6A2P12110 RNA5SP34-201ENST00000516887 130 ntBASIC4.79□□□□□ -1.64
COL6A2P12110 RN7SKP277-201ENST00000516895 283 ntBASIC4.79□□□□□ -1.64
COL6A2P12110 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.79□□□□□ -1.64
COL6A2P12110 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.79□□□□□ -1.64
COL6A2P12110 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.79□□□□□ -1.64
COL6A2P12110 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.79□□□□□ -1.64
COL6A2P12110 BNIP3P6-201ENST00000549284 499 ntBASIC4.79□□□□□ -1.64
COL6A2P12110 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms