Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.37□□□□□ -1.71
RHOP08100 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RHOP08100 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
RHOP08100 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RHOP08100 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
RHOP08100 RNA5SP171-201ENST00000391071 115 ntBASIC4.37□□□□□ -1.71
RHOP08100 AC016769.3-201ENST00000396562 315 ntBASIC4.37□□□□□ -1.71
RHOP08100 RPS3AP36-201ENST00000398190 775 ntBASIC4.37□□□□□ -1.71
RHOP08100 RPL7P25-201ENST00000404151 721 ntBASIC4.37□□□□□ -1.71
RHOP08100 AL590002.1-201ENST00000406554 418 ntBASIC4.37□□□□□ -1.71
RHOP08100 CCNG1P1-201ENST00000406783 885 ntBASIC4.37□□□□□ -1.71
RHOP08100 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RHOP08100 AC069157.1-201ENST00000421749 137 ntBASIC4.37□□□□□ -1.71
RHOP08100 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.37□□□□□ -1.71
RHOP08100 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.37□□□□□ -1.71
RHOP08100 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.37□□□□□ -1.71
RHOP08100 AC002381.1-201ENST00000447049 280 ntBASIC4.37□□□□□ -1.71
RHOP08100 AC079448.1-201ENST00000449377 373 ntBASIC4.37□□□□□ -1.71
RHOP08100 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.37□□□□□ -1.71
RHOP08100 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.37□□□□□ -1.71
RHOP08100 AC108022.1-201ENST00000493466 478 ntBASIC4.37□□□□□ -1.71
RHOP08100 RNU2-46P-201ENST00000517038 113 ntBASIC4.37□□□□□ -1.71
RHOP08100 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
RHOP08100 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.37□□□□□ -1.71
RHOP08100 OR5AQ1P-201ENST00000527596 927 ntBASIC4.37□□□□□ -1.71
RHOP08100 AC022882.1-201ENST00000532142 501 ntBASIC4.37□□□□□ -1.71
RHOP08100 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.37□□□□□ -1.71
RHOP08100 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.37□□□□□ -1.71
RHOP08100 AL157394.1-201ENST00000562983 1224 ntBASIC4.37□□□□□ -1.71
RHOP08100 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.37□□□□□ -1.71
RHOP08100 AC034268.2-201ENST00000571784 482 ntBASIC4.37□□□□□ -1.71
RHOP08100 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.37□□□□□ -1.71
RHOP08100 AL353997.4-201ENST00000586196 166 ntBASIC4.37□□□□□ -1.71
RHOP08100 HMGN1P30-201ENST00000589286 268 ntBASIC4.37□□□□□ -1.71
RHOP08100 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.37□□□□□ -1.71
RHOP08100 AL606490.9-201ENST00000603331 271 ntBASIC4.37□□□□□ -1.71
RHOP08100 AL590282.1-201ENST00000610379 1136 ntBASIC4.37□□□□□ -1.71
RHOP08100 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RHOP08100 AC099669.2-201ENST00000616549 437 ntBASIC4.37□□□□□ -1.71
RHOP08100 AC068880.5-201ENST00000624331 290 ntBASIC4.37□□□□□ -1.71
RHOP08100 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.37□□□□□ -1.71
RHOP08100 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RHOP08100 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RHOP08100 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RHOP08100 SCN1A-220ENST00000641603 12506 ntBASIC4.37□□□□□ -1.71
RHOP08100 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
RHOP08100 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
RHOP08100 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
RHOP08100 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.36□□□□□ -1.71
RHOP08100 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RHOP08100 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RHOP08100 MIR670-201ENST00000390142 98 ntBASIC4.36□□□□□ -1.71
RHOP08100 CALM2P3-201ENST00000400429 449 ntBASIC4.36□□□□□ -1.71
RHOP08100 AL031679.1-201ENST00000400616 525 ntBASIC4.36□□□□□ -1.71
RHOP08100 RPS20P2-201ENST00000402520 389 ntBASIC4.36□□□□□ -1.71
RHOP08100 FCF1P10-201ENST00000407590 479 ntBASIC4.36□□□□□ -1.71
RHOP08100 RNU4-55P-201ENST00000410731 137 ntBASIC4.36□□□□□ -1.71
RHOP08100 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RHOP08100 SPA17P1-201ENST00000416656 452 ntBASIC4.36□□□□□ -1.71
RHOP08100 CCDC58P2-201ENST00000417131 366 ntBASIC4.36□□□□□ -1.71
RHOP08100 PIGFP2-201ENST00000421400 651 ntBASIC4.36□□□□□ -1.71
RHOP08100 RPL30P3-201ENST00000424262 333 ntBASIC4.36□□□□□ -1.71
RHOP08100 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.36□□□□□ -1.71
RHOP08100 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.36□□□□□ -1.71
RHOP08100 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.36□□□□□ -1.71
RHOP08100 AL451074.3-201ENST00000437709 472 ntBASIC4.36□□□□□ -1.71
RHOP08100 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.36□□□□□ -1.71
RHOP08100 AL031584.1-201ENST00000447169 754 ntBASIC4.36□□□□□ -1.71
RHOP08100 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.36□□□□□ -1.71
RHOP08100 AC099563.1-201ENST00000456086 418 ntBASIC4.36□□□□□ -1.71
RHOP08100 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
RHOP08100 HMGB1P36-201ENST00000487709 576 ntBASIC4.36□□□□□ -1.71
RHOP08100 AC104164.2-201ENST00000496953 495 ntBASIC4.36□□□□□ -1.71
RHOP08100 FTH1P24-201ENST00000503502 462 ntBASIC4.36□□□□□ -1.71
RHOP08100 ARL4AP2-201ENST00000507378 601 ntBASIC4.36□□□□□ -1.71
RHOP08100 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.36□□□□□ -1.71
RHOP08100 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.36□□□□□ -1.71
RHOP08100 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.36□□□□□ -1.71
RHOP08100 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.36□□□□□ -1.71
RHOP08100 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.36□□□□□ -1.71
RHOP08100 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.36□□□□□ -1.71
RHOP08100 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.36□□□□□ -1.71
RHOP08100 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.36□□□□□ -1.71
RHOP08100 HMGB1P33-201ENST00000563485 527 ntBASIC4.36□□□□□ -1.71
RHOP08100 CKS1BP3-201ENST00000600888 237 ntBASIC4.36□□□□□ -1.71
RHOP08100 DUXAP4-201ENST00000603046 613 ntBASIC4.36□□□□□ -1.71
RHOP08100 RPL23AP92-201ENST00000603609 255 ntBASIC4.36□□□□□ -1.71
RHOP08100 AC245014.2-201ENST00000603689 287 ntBASIC4.36□□□□□ -1.71
RHOP08100 AC246785.4-201ENST00000605374 287 ntBASIC4.36□□□□□ -1.71
RHOP08100 LARP7P1-201ENST00000605576 316 ntBASIC4.36□□□□□ -1.71
RHOP08100 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.36□□□□□ -1.71
RHOP08100 MIR7151-201ENST00000617477 60 ntBASIC4.36□□□□□ -1.71
RHOP08100 MIR6864-201ENST00000617935 70 ntBASIC4.36□□□□□ -1.71
RHOP08100 AC006338.1-201ENST00000618453 749 ntBASIC4.36□□□□□ -1.71
RHOP08100 AC110994.2-201ENST00000635481 492 ntBASIC4.36□□□□□ -1.71
RHOP08100 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.36□□□□□ -1.71
RHOP08100 FAM91A3P-201ENST00000456826 2544 ntBASIC4.36□□□□□ -1.71
RHOP08100 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RHOP08100 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RHOP08100 SAGE2P-201ENST00000420011 2126 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms