Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RNU6-1249P-201ENST00000363237 111 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 RNU6-236P-201ENST00000363886 106 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 SNORA51.6-201ENST00000384151 125 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 SNORD15B-201ENST00000384714 146 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 MIR181B1-201ENST00000385240 110 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 U3.29-201ENST00000391296 212 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 AC016769.3-201ENST00000396562 315 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 EIF5P1-201ENST00000400019 1231 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 LUZP4P1-201ENST00000415420 344 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DPB1P04440 MTCO3P1-205ENST00000422088 832 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DPB1P04440 MUPP-201ENST00000438111 566 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 AC241584.1-201ENST00000438469 1241 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 AC093155.1-201ENST00000440164 826 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.68□□□□□ -1.98
HLA-DPB1P04440 ELOCP13-201ENST00000443934 329 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 COX6CP2-201ENST00000444980 225 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DPB1P04440 AC112492.1-201ENST00000449607 712 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.68□□□□□ -1.98
HLA-DPB1P04440 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DPB1P04440 VN1R17P-201ENST00000472048 1090 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 AC109925.1-201ENST00000478069 331 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 VPS26AP1-201ENST00000483197 979 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DPB1P04440 AC008427.1-201ENST00000503102 655 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 AC112206.4-201ENST00000515142 405 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 AP003102.1-201ENST00000525638 661 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DPB1P04440 AC109635.4-202ENST00000531666 412 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.68□□□□□ -1.98
HLA-DPB1P04440 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.68□□□□□ -1.98
HLA-DPB1P04440 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.68□□□□□ -1.98
HLA-DPB1P04440 AC090502.2-201ENST00000549267 280 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 SYF2P1-201ENST00000550658 413 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DPB1P04440 UBL5P2-201ENST00000583788 219 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.68□□□□□ -1.98
HLA-DPB1P04440 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.68□□□□□ -1.98
HLA-DPB1P04440 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DPB1P04440 BNIP3P33-201ENST00000598912 569 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 BNIP3P31-201ENST00000604515 566 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 AC091946.2-201ENST00000606105 291 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 AL020991.1-201ENST00000612314 373 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 XIST_intron.1-201ENST00000619444 68 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 AC010338.1-201ENST00000621823 717 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 AC018692.3-201ENST00000623929 123 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 AC026422.1-201ENST00000623961 452 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.68□□□□□ -1.98
HLA-DPB1P04440 AC087821.2-201ENST00000637086 450 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DPB1P04440 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DPB1P04440 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.68□□□□□ -1.98
HLA-DPB1P04440 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.68□□□□□ -1.98
HLA-DPB1P04440 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DPB1P04440 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.67□□□□□ -1.98
HLA-DPB1P04440 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DPB1P04440 AL079305.1-201ENST00000623159 3008 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DPB1P04440 RPL9P7-201ENST00000330965 580 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
HLA-DPB1P04440 RNU6-492P-201ENST00000363035 104 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 SNORA38.1-201ENST00000364172 131 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
HLA-DPB1P04440 RNU6-1257P-201ENST00000384625 110 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
HLA-DPB1P04440 SNORD67-201ENST00000390833 111 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 SNORD65.1-201ENST00000390889 71 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 RNU6-837P-201ENST00000391056 108 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 ARF4P3-201ENST00000397387 509 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 AL079342.2-201ENST00000403367 482 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 RNU4-47P-201ENST00000410876 114 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 AL133384.1-201ENST00000412744 351 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 PTP4A1P7-201ENST00000423476 514 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 RPL21P66-201ENST00000426566 466 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DPB1P04440 MTCYBP42-201ENST00000444653 1130 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DPB1P04440 AL034418.1-201ENST00000448675 860 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 HMGN2P16-201ENST00000456802 261 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 snoU13.24-201ENST00000458998 104 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 AC010301.1-201ENST00000473936 355 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DPB1P04440 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DPB1P04440 AC093767.1-201ENST00000504523 156 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DPB1P04440 AC093752.1-206ENST00000511823 336 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 GMPSP1-201ENST00000514075 579 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 RNA5SP76-201ENST00000516277 87 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 RNU6-1028P-201ENST00000517164 93 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DPB1P04440 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DPB1P04440 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.67□□□□□ -1.98
HLA-DPB1P04440 AC034105.3-201ENST00000565294 442 ntBASIC2.67□□□□□ -1.98
HLA-DPB1P04440 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DPB1P04440 MIR5708-201ENST00000579723 85 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms