Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.27□□□□□ -2.05
TNFP01375 Z96811.1-201ENST00000445880 108 ntBASIC2.27□□□□□ -2.05
TNFP01375 AP000705.1-201ENST00000454567 350 ntBASIC2.27□□□□□ -2.05
TNFP01375 LINC00888-204ENST00000487386 421 ntBASIC2.27□□□□□ -2.05
TNFP01375 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.27□□□□□ -2.05
TNFP01375 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC2.27□□□□□ -2.05
TNFP01375 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TNFP01375 MTND5P4-201ENST00000514978 288 ntBASIC2.27□□□□□ -2.05
TNFP01375 MTCYBP20-201ENST00000524239 1129 ntBASIC2.27□□□□□ -2.05
TNFP01375 AP001317.1-201ENST00000531194 960 ntBASIC2.27□□□□□ -2.05
TNFP01375 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.27□□□□□ -2.05
TNFP01375 AC025423.2-201ENST00000537570 439 ntBASIC2.27□□□□□ -2.05
TNFP01375 AC125611.2-201ENST00000551907 647 ntBASIC2.27□□□□□ -2.05
TNFP01375 AADACP1-206ENST00000561502 1193 ntBASIC2.27□□□□□ -2.05
TNFP01375 MIR1273D-201ENST00000577266 86 ntBASIC2.27□□□□□ -2.05
TNFP01375 MIR4648-201ENST00000580107 72 ntBASIC2.27□□□□□ -2.05
TNFP01375 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.27□□□□□ -2.05
TNFP01375 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
TNFP01375 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.27□□□□□ -2.05
TNFP01375 AC090897.3-201ENST00000636973 1157 ntBASIC2.27□□□□□ -2.05
TNFP01375 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TNFP01375 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.27□□□□□ -2.05
TNFP01375 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
TNFP01375 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.26□□□□□ -2.05
TNFP01375 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TNFP01375 CD24P4-201ENST00000382840 243 ntBASIC2.26□□□□□ -2.05
TNFP01375 AL138880.1-201ENST00000405824 642 ntBASIC2.26□□□□□ -2.05
TNFP01375 FAT1P1-201ENST00000406588 507 ntBASIC2.26□□□□□ -2.05
TNFP01375 HMGN2P35-201ENST00000412164 270 ntBASIC2.26□□□□□ -2.05
TNFP01375 AC244098.2-201ENST00000422068 99 ntBASIC2.26□□□□□ -2.05
TNFP01375 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.26□□□□□ -2.05
TNFP01375 RPS15AP28-201ENST00000435088 386 ntBASIC2.26□□□□□ -2.05
TNFP01375 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
TNFP01375 RPL23AP33-201ENST00000442301 452 ntBASIC2.26□□□□□ -2.05
TNFP01375 YWHAEP4-201ENST00000505390 198 ntBASIC2.26□□□□□ -2.05
TNFP01375 ACTR6P1-201ENST00000514311 1104 ntBASIC2.26□□□□□ -2.05
TNFP01375 RNU1-61P-201ENST00000516107 151 ntBASIC2.26□□□□□ -2.05
TNFP01375 COX6B1P6-201ENST00000522347 255 ntBASIC2.26□□□□□ -2.05
TNFP01375 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.26□□□□□ -2.05
TNFP01375 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
TNFP01375 SNRPGP18-201ENST00000553000 214 ntBASIC2.26□□□□□ -2.05
TNFP01375 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.26□□□□□ -2.05
TNFP01375 AC007620.3-201ENST00000608131 497 ntBASIC2.26□□□□□ -2.05
TNFP01375 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
TNFP01375 AC006249.1-201ENST00000621223 471 ntBASIC2.26□□□□□ -2.05
TNFP01375 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.26□□□□□ -2.05
TNFP01375 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
TNFP01375 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TNFP01375 CUL1P1-201ENST00000509510 2425 ntBASIC2.26□□□□□ -2.05
TNFP01375 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC2.25□□□□□ -2.05
TNFP01375 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
TNFP01375 MIR21-201ENST00000362134 72 ntBASIC2.25□□□□□ -2.05
TNFP01375 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
TNFP01375 RNU6-1077P-201ENST00000410506 102 ntBASIC2.25□□□□□ -2.05
TNFP01375 BX682237.1-201ENST00000415016 335 ntBASIC2.25□□□□□ -2.05
TNFP01375 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.25□□□□□ -2.05
TNFP01375 AC023128.2-201ENST00000420880 1223 ntBASIC2.25□□□□□ -2.05
TNFP01375 AL121890.1-201ENST00000435457 205 ntBASIC2.25□□□□□ -2.05
TNFP01375 AC133134.1-201ENST00000466800 359 ntBASIC2.25□□□□□ -2.05
TNFP01375 RPS29P21-201ENST00000496272 170 ntBASIC2.25□□□□□ -2.05
TNFP01375 RNU6-1073P-201ENST00000517182 106 ntBASIC2.25□□□□□ -2.05
TNFP01375 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.25□□□□□ -2.05
TNFP01375 AC026464.5-201ENST00000562497 722 ntBASIC2.25□□□□□ -2.05
TNFP01375 AC234775.3-201ENST00000564612 656 ntBASIC2.25□□□□□ -2.05
TNFP01375 AC104984.5-201ENST00000586878 94 ntBASIC2.25□□□□□ -2.05
TNFP01375 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.25□□□□□ -2.05
TNFP01375 AC069304.3-201ENST00000603938 1084 ntBASIC2.25□□□□□ -2.05
TNFP01375 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.25□□□□□ -2.05
TNFP01375 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.24□□□□□ -2.05
TNFP01375 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
TNFP01375 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
TNFP01375 DEFB109C-201ENST00000382575 264 ntBASIC2.24□□□□□ -2.05
TNFP01375 DEFB109B-201ENST00000382656 264 ntBASIC2.24□□□□□ -2.05
TNFP01375 AL096701.2-201ENST00000416920 238 ntBASIC2.24□□□□□ -2.05
TNFP01375 MTND4P11-201ENST00000417020 1058 ntBASIC2.24□□□□□ -2.05
TNFP01375 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.24□□□□□ -2.05
TNFP01375 RNU7-27P-201ENST00000459281 62 ntBASIC2.24□□□□□ -2.05
TNFP01375 MTCO3P35-201ENST00000485582 781 ntBASIC2.24□□□□□ -2.05
TNFP01375 HMGB1P38-201ENST00000490557 577 ntBASIC2.24□□□□□ -2.05
TNFP01375 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.24□□□□□ -2.05
TNFP01375 SEM1P1-201ENST00000506694 209 ntBASIC2.24□□□□□ -2.05
TNFP01375 AC090071.1-201ENST00000507713 644 ntBASIC2.24□□□□□ -2.05
TNFP01375 TBCAP3-201ENST00000512475 312 ntBASIC2.24□□□□□ -2.05
TNFP01375 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC2.24□□□□□ -2.05
TNFP01375 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.24□□□□□ -2.05
TNFP01375 EIF5A2P1-201ENST00000564027 460 ntBASIC2.24□□□□□ -2.05
TNFP01375 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.24□□□□□ -2.05
TNFP01375 SNHG22-203ENST00000617833 660 ntBASIC2.24□□□□□ -2.05
TNFP01375 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
TNFP01375 Z99496.1-201ENST00000469424 1477 ntBASIC2.24□□□□□ -2.05
TNFP01375 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.23□□□□□ -2.05
TNFP01375 MTND5P6-201ENST00000422338 1798 ntBASIC2.23□□□□□ -2.05
TNFP01375 SNORA25.6-201ENST00000364121 118 ntBASIC2.23□□□□□ -2.05
TNFP01375 RNU6-335P-201ENST00000364563 113 ntBASIC2.23□□□□□ -2.05
TNFP01375 FO393413.1-201ENST00000402892 195 ntBASIC2.23□□□□□ -2.05
TNFP01375 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.23□□□□□ -2.05
TNFP01375 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.23□□□□□ -2.05
TNFP01375 AC096638.1-201ENST00000444678 216 ntBASIC2.23□□□□□ -2.05
TNFP01375 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.23□□□□□ -2.05
TNFP01375 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms