Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC093510.2-201ENST00000562820 896 ntBASIC2.98□□□□□ -1.93
CTDNEP1O95476 TMF1P1-201ENST00000576058 373 ntBASIC2.98□□□□□ -1.93
CTDNEP1O95476 SNRPGP15-201ENST00000600149 222 ntBASIC2.98□□□□□ -1.93
CTDNEP1O95476 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.98□□□□□ -1.93
CTDNEP1O95476 AL627309.6-201ENST00000606857 840 ntBASIC2.98□□□□□ -1.93
CTDNEP1O95476 AP005229.2-201ENST00000609980 697 ntBASIC2.98□□□□□ -1.93
CTDNEP1O95476 AC006249.1-201ENST00000621223 471 ntBASIC2.98□□□□□ -1.93
CTDNEP1O95476 AL138960.2-201ENST00000625145 535 ntBASIC2.98□□□□□ -1.93
CTDNEP1O95476 MTCO1P18-201ENST00000455518 1419 ntBASIC2.98□□□□□ -1.93
CTDNEP1O95476 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CTDNEP1O95476 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
CTDNEP1O95476 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CTDNEP1O95476 SNORA25.6-201ENST00000364121 118 ntBASIC2.97□□□□□ -1.93
CTDNEP1O95476 RNU6-354P-201ENST00000383862 107 ntBASIC2.97□□□□□ -1.93
CTDNEP1O95476 RNU6-610P-201ENST00000384264 107 ntBASIC2.97□□□□□ -1.93
CTDNEP1O95476 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.97□□□□□ -1.93
CTDNEP1O95476 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.97□□□□□ -1.93
CTDNEP1O95476 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.97□□□□□ -1.93
CTDNEP1O95476 AC091390.3-201ENST00000426478 338 ntBASIC2.97□□□□□ -1.93
CTDNEP1O95476 RPL23AP83-201ENST00000434984 473 ntBASIC2.97□□□□□ -1.93
CTDNEP1O95476 HSPE1P28-201ENST00000443139 211 ntBASIC2.97□□□□□ -1.93
CTDNEP1O95476 Z77249.1-201ENST00000444622 1175 ntBASIC2.97□□□□□ -1.93
CTDNEP1O95476 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.97□□□□□ -1.93
CTDNEP1O95476 RPS15AP1-201ENST00000457423 391 ntBASIC2.97□□□□□ -1.93
CTDNEP1O95476 SRIP1-201ENST00000489235 288 ntBASIC2.97□□□□□ -1.93
CTDNEP1O95476 AC104629.1-201ENST00000494226 508 ntBASIC2.97□□□□□ -1.93
CTDNEP1O95476 RPS27P27-201ENST00000498779 255 ntBASIC2.97□□□□□ -1.93
CTDNEP1O95476 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.97□□□□□ -1.93
CTDNEP1O95476 AC112518.2-201ENST00000508565 425 ntBASIC2.97□□□□□ -1.93
CTDNEP1O95476 AC090136.1-201ENST00000520009 240 ntBASIC2.97□□□□□ -1.93
CTDNEP1O95476 AF279873.1-201ENST00000523393 313 ntBASIC2.97□□□□□ -1.93
CTDNEP1O95476 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.97□□□□□ -1.93
CTDNEP1O95476 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.97□□□□□ -1.93
CTDNEP1O95476 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.97□□□□□ -1.93
CTDNEP1O95476 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.97□□□□□ -1.93
CTDNEP1O95476 AL133393.1-201ENST00000603277 287 ntBASIC2.97□□□□□ -1.93
CTDNEP1O95476 AL109620.1-201ENST00000618738 1197 ntBASIC2.97□□□□□ -1.93
CTDNEP1O95476 AC073569.3-201ENST00000619055 682 ntBASIC2.97□□□□□ -1.93
CTDNEP1O95476 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.97□□□□□ -1.93
CTDNEP1O95476 AC106858.1-201ENST00000637497 429 ntBASIC2.97□□□□□ -1.93
CTDNEP1O95476 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.97□□□□□ -1.93
CTDNEP1O95476 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.97□□□□□ -1.93
CTDNEP1O95476 AC117529.2-201ENST00000512159 2068 ntBASIC2.96□□□□□ -1.94
CTDNEP1O95476 ENSAP3-201ENST00000312710 333 ntBASIC2.96□□□□□ -1.94
CTDNEP1O95476 AC062016.1-201ENST00000355719 319 ntBASIC2.96□□□□□ -1.94
CTDNEP1O95476 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CTDNEP1O95476 SAR1AP2-201ENST00000392696 594 ntBASIC2.96□□□□□ -1.94
CTDNEP1O95476 AC080125.1-201ENST00000414888 684 ntBASIC2.96□□□□□ -1.94
CTDNEP1O95476 AC008173.1-201ENST00000418901 264 ntBASIC2.96□□□□□ -1.94
CTDNEP1O95476 AC073310.1-201ENST00000423226 1033 ntBASIC2.96□□□□□ -1.94
CTDNEP1O95476 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.96□□□□□ -1.94
CTDNEP1O95476 TRIM60P18-201ENST00000441518 828 ntBASIC2.96□□□□□ -1.94
CTDNEP1O95476 AC068135.1-201ENST00000446164 246 ntBASIC2.96□□□□□ -1.94
CTDNEP1O95476 AC008379.1-201ENST00000463655 464 ntBASIC2.96□□□□□ -1.94
CTDNEP1O95476 AC126182.1-201ENST00000478134 357 ntBASIC2.96□□□□□ -1.94
CTDNEP1O95476 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CTDNEP1O95476 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.96□□□□□ -1.94
CTDNEP1O95476 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.96□□□□□ -1.94
CTDNEP1O95476 AC008494.2-201ENST00000514544 370 ntBASIC2.96□□□□□ -1.94
CTDNEP1O95476 HIGD1AP3-201ENST00000515857 278 ntBASIC2.96□□□□□ -1.94
CTDNEP1O95476 AP003355.1-201ENST00000518956 587 ntBASIC2.96□□□□□ -1.94
CTDNEP1O95476 HMGB1P41-201ENST00000520234 440 ntBASIC2.96□□□□□ -1.94
CTDNEP1O95476 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.96□□□□□ -1.94
CTDNEP1O95476 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.96□□□□□ -1.94
CTDNEP1O95476 AP003717.3-201ENST00000544832 1180 ntBASIC2.96□□□□□ -1.94
CTDNEP1O95476 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.96□□□□□ -1.94
CTDNEP1O95476 LARP7P3-201ENST00000579888 337 ntBASIC2.96□□□□□ -1.94
CTDNEP1O95476 MAGOH2P-202ENST00000584384 429 ntBASIC2.96□□□□□ -1.94
CTDNEP1O95476 AC010620.2-201ENST00000600135 313 ntBASIC2.96□□□□□ -1.94
CTDNEP1O95476 AC021851.1-201ENST00000608537 1082 ntBASIC2.96□□□□□ -1.94
CTDNEP1O95476 AC096586.1-201ENST00000610267 561 ntBASIC2.96□□□□□ -1.94
CTDNEP1O95476 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.96□□□□□ -1.94
CTDNEP1O95476 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.96□□□□□ -1.94
CTDNEP1O95476 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.96□□□□□ -1.94
CTDNEP1O95476 AC002546.1-201ENST00000588041 2504 ntBASIC2.96□□□□□ -1.94
CTDNEP1O95476 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.96□□□□□ -1.94
CTDNEP1O95476 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CTDNEP1O95476 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.96□□□□□ -1.94
CTDNEP1O95476 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.96□□□□□ -1.94
CTDNEP1O95476 AC004925.1-201ENST00000624256 2706 ntBASIC2.96□□□□□ -1.94
CTDNEP1O95476 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.95□□□□□ -1.94
CTDNEP1O95476 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.95□□□□□ -1.94
CTDNEP1O95476 FAM35CP-201ENST00000554755 2470 ntBASIC2.95□□□□□ -1.94
CTDNEP1O95476 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CTDNEP1O95476 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CTDNEP1O95476 SNORD62.1-201ENST00000362541 86 ntBASIC2.95□□□□□ -1.94
CTDNEP1O95476 RNU6-859P-201ENST00000362728 107 ntBASIC2.95□□□□□ -1.94
CTDNEP1O95476 RNU6-335P-201ENST00000364563 113 ntBASIC2.95□□□□□ -1.94
CTDNEP1O95476 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CTDNEP1O95476 AL035405.1-201ENST00000400795 710 ntBASIC2.95□□□□□ -1.94
CTDNEP1O95476 AL354719.1-201ENST00000406535 843 ntBASIC2.95□□□□□ -1.94
CTDNEP1O95476 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CTDNEP1O95476 MRPL50P2-201ENST00000416821 482 ntBASIC2.95□□□□□ -1.94
CTDNEP1O95476 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.95□□□□□ -1.94
CTDNEP1O95476 COTL1P1-201ENST00000422309 375 ntBASIC2.95□□□□□ -1.94
CTDNEP1O95476 AL513175.1-201ENST00000431492 780 ntBASIC2.95□□□□□ -1.94
CTDNEP1O95476 YWHAZP7-201ENST00000436906 631 ntBASIC2.95□□□□□ -1.94
CTDNEP1O95476 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.95□□□□□ -1.94
CTDNEP1O95476 GXYLT1P1-201ENST00000446657 490 ntBASIC2.95□□□□□ -1.94
CTDNEP1O95476 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms