Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ACTN4O43707 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.47□□□□□ -1.37
ACTN4O43707 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ACTN4O43707 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
ACTN4O43707 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.47□□□□□ -1.37
ACTN4O43707 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ACTN4O43707 RNU1-76P-201ENST00000362903 159 ntBASIC6.47□□□□□ -1.37
ACTN4O43707 RNU6-1329P-201ENST00000365664 107 ntBASIC6.47□□□□□ -1.37
ACTN4O43707 RNY1P5-201ENST00000383890 115 ntBASIC6.47□□□□□ -1.37
ACTN4O43707 MIR130A-201ENST00000385274 89 ntBASIC6.47□□□□□ -1.37
ACTN4O43707 RNA5SP431-201ENST00000410312 120 ntBASIC6.47□□□□□ -1.37
ACTN4O43707 COX6CP10-201ENST00000416832 224 ntBASIC6.47□□□□□ -1.37
ACTN4O43707 BX276092.6-201ENST00000430476 250 ntBASIC6.47□□□□□ -1.37
ACTN4O43707 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.47□□□□□ -1.37
ACTN4O43707 AL591704.1-201ENST00000432574 275 ntBASIC6.47□□□□□ -1.37
ACTN4O43707 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC6.47□□□□□ -1.37
ACTN4O43707 BX276092.8-201ENST00000455722 250 ntBASIC6.47□□□□□ -1.37
ACTN4O43707 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.47□□□□□ -1.37
ACTN4O43707 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC6.47□□□□□ -1.37
ACTN4O43707 AC008716.1-201ENST00000511084 513 ntBASIC6.47□□□□□ -1.37
ACTN4O43707 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.47□□□□□ -1.37
ACTN4O43707 AC104576.1-201ENST00000524225 88 ntBASIC6.47□□□□□ -1.37
ACTN4O43707 AP006587.4-201ENST00000526053 529 ntBASIC6.47□□□□□ -1.37
ACTN4O43707 AC024405.2-202ENST00000532731 184 ntBASIC6.47□□□□□ -1.37
ACTN4O43707 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC6.47□□□□□ -1.37
ACTN4O43707 AC004584.2-201ENST00000570407 410 ntBASIC6.47□□□□□ -1.37
ACTN4O43707 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC6.47□□□□□ -1.37
ACTN4O43707 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC6.47□□□□□ -1.37
ACTN4O43707 AC008507.3-201ENST00000585753 472 ntBASIC6.47□□□□□ -1.37
ACTN4O43707 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC6.47□□□□□ -1.37
ACTN4O43707 TEX41-280ENST00000629185 591 ntTSL 5 BASIC6.47□□□□□ -1.37
ACTN4O43707 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
ACTN4O43707 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
ACTN4O43707 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
ACTN4O43707 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.47□□□□□ -1.37
ACTN4O43707 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ACTN4O43707 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ACTN4O43707 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ACTN4O43707 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ACTN4O43707 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ACTN4O43707 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
ACTN4O43707 AC006206.1-201ENST00000544842 3387 ntBASIC6.46□□□□□ -1.37
ACTN4O43707 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
ACTN4O43707 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
ACTN4O43707 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.46□□□□□ -1.37
ACTN4O43707 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
ACTN4O43707 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
ACTN4O43707 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
ACTN4O43707 COX6B1P3-201ENST00000312310 260 ntBASIC6.46□□□□□ -1.38
ACTN4O43707 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
ACTN4O43707 MIR411-201ENST00000362239 96 ntBASIC6.46□□□□□ -1.38
ACTN4O43707 RNU6-682P-201ENST00000363843 106 ntBASIC6.46□□□□□ -1.38
ACTN4O43707 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.46□□□□□ -1.38
ACTN4O43707 MRPL53P1-201ENST00000414323 319 ntBASIC6.46□□□□□ -1.38
ACTN4O43707 EIF4EP2-201ENST00000422816 654 ntBASIC6.46□□□□□ -1.38
ACTN4O43707 RPS12P5-201ENST00000423449 371 ntBASIC6.46□□□□□ -1.38
ACTN4O43707 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC6.46□□□□□ -1.38
ACTN4O43707 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
ACTN4O43707 AC007679.3-201ENST00000434035 414 ntBASIC6.46□□□□□ -1.38
ACTN4O43707 OR4C10P-201ENST00000434991 931 ntBASIC6.46□□□□□ -1.38
ACTN4O43707 EEF1B2P3-201ENST00000447718 678 ntBASIC6.46□□□□□ -1.38
ACTN4O43707 AC009963.3-201ENST00000458090 486 ntBASIC6.46□□□□□ -1.38
ACTN4O43707 AC091180.1-201ENST00000462104 372 ntBASIC6.46□□□□□ -1.38
ACTN4O43707 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.46□□□□□ -1.38
ACTN4O43707 DUTP1-201ENST00000493631 470 ntBASIC6.46□□□□□ -1.38
ACTN4O43707 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.46□□□□□ -1.38
ACTN4O43707 RNU6-911P-201ENST00000516523 104 ntBASIC6.46□□□□□ -1.38
ACTN4O43707 Y_RNA.713-201ENST00000517013 96 ntBASIC6.46□□□□□ -1.38
ACTN4O43707 AP000648.1-201ENST00000529682 397 ntBASIC6.46□□□□□ -1.38
ACTN4O43707 AC084121.1-201ENST00000533882 835 ntBASIC6.46□□□□□ -1.38
ACTN4O43707 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
ACTN4O43707 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.46□□□□□ -1.38
ACTN4O43707 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
ACTN4O43707 AC007956.1-201ENST00000555623 542 ntBASIC6.46□□□□□ -1.38
ACTN4O43707 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.46□□□□□ -1.38
ACTN4O43707 CYCSP38-201ENST00000559840 322 ntBASIC6.46□□□□□ -1.38
ACTN4O43707 AC096996.1-201ENST00000563813 325 ntBASIC6.46□□□□□ -1.38
ACTN4O43707 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.46□□□□□ -1.38
ACTN4O43707 AL359091.2-201ENST00000609303 556 ntBASIC6.46□□□□□ -1.38
ACTN4O43707 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.46□□□□□ -1.38
ACTN4O43707 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC6.46□□□□□ -1.38
ACTN4O43707 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
ACTN4O43707 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.46□□□□□ -1.38
ACTN4O43707 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.46□□□□□ -1.38
ACTN4O43707 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
ACTN4O43707 AP000550.3-201ENST00000637734 379 ntBASIC6.46□□□□□ -1.38
ACTN4O43707 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
ACTN4O43707 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
ACTN4O43707 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
ACTN4O43707 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
ACTN4O43707 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.45□□□□□ -1.38
ACTN4O43707 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
ACTN4O43707 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.45□□□□□ -1.38
ACTN4O43707 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
ACTN4O43707 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
ACTN4O43707 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
ACTN4O43707 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.45□□□□□ -1.38
ACTN4O43707 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.45□□□□□ -1.38
ACTN4O43707 RNA5SP273-201ENST00000362484 113 ntBASIC6.45□□□□□ -1.38
ACTN4O43707 SNORD50.2-201ENST00000365465 70 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms