Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AP000676.4-201ENST00000624659 623 ntBASIC3.01□□□□□ -1.93
LSM1O15116 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.01□□□□□ -1.93
LSM1O15116 AC090740.1-201ENST00000623193 2262 ntBASIC3.01□□□□□ -1.93
LSM1O15116 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.01□□□□□ -1.93
LSM1O15116 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.01□□□□□ -1.93
LSM1O15116 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
LSM1O15116 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3□□□□□ -1.93
LSM1O15116 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
LSM1O15116 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LSM1O15116 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3□□□□□ -1.93
LSM1O15116 RNU6-839P-201ENST00000363347 108 ntBASIC3□□□□□ -1.93
LSM1O15116 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3□□□□□ -1.93
LSM1O15116 HMGN2P35-201ENST00000412164 270 ntBASIC3□□□□□ -1.93
LSM1O15116 AC027644.1-201ENST00000419595 298 ntBASIC3□□□□□ -1.93
LSM1O15116 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3□□□□□ -1.93
LSM1O15116 AC241584.1-201ENST00000438469 1241 ntBASIC3□□□□□ -1.93
LSM1O15116 AC108734.1-201ENST00000439549 399 ntBASIC3□□□□□ -1.93
LSM1O15116 NDUFA5P7-201ENST00000452914 242 ntBASIC3□□□□□ -1.93
LSM1O15116 AC112518.2-201ENST00000508565 425 ntBASIC3□□□□□ -1.93
LSM1O15116 AC002456.2-201ENST00000509356 380 ntBASIC3□□□□□ -1.93
LSM1O15116 AC027338.1-201ENST00000514840 825 ntBASIC3□□□□□ -1.93
LSM1O15116 RNU6-1095P-201ENST00000516148 108 ntBASIC3□□□□□ -1.93
LSM1O15116 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3□□□□□ -1.93
LSM1O15116 AC012119.1-201ENST00000603184 222 ntBASIC3□□□□□ -1.93
LSM1O15116 AC009220.3-201ENST00000604318 586 ntBASIC3□□□□□ -1.93
LSM1O15116 AC091925.2-201ENST00000625059 256 ntBASIC3□□□□□ -1.93
LSM1O15116 AC139713.2-210ENST00000641741 992 ntBASIC3□□□□□ -1.93
LSM1O15116 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LSM1O15116 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
LSM1O15116 DBF4P1-201ENST00000412976 1892 ntBASIC3□□□□□ -1.93
LSM1O15116 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3□□□□□ -1.93
LSM1O15116 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LSM1O15116 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LSM1O15116 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LSM1O15116 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3□□□□□ -1.93
LSM1O15116 AC024341.1-201ENST00000526444 1552 ntBASIC3□□□□□ -1.93
LSM1O15116 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
LSM1O15116 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
LSM1O15116 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LSM1O15116 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.99□□□□□ -1.93
LSM1O15116 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.99□□□□□ -1.93
LSM1O15116 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
LSM1O15116 OR1S2-201ENST00000302592 978 ntBASIC2.99□□□□□ -1.93
LSM1O15116 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LSM1O15116 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.99□□□□□ -1.93
LSM1O15116 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
LSM1O15116 RNU1-109P-201ENST00000383960 147 ntBASIC2.99□□□□□ -1.93
LSM1O15116 MIR217-201ENST00000384817 110 ntBASIC2.99□□□□□ -1.93
LSM1O15116 RPL22P22-201ENST00000395439 379 ntBASIC2.99□□□□□ -1.93
LSM1O15116 AC110754.1-201ENST00000399740 601 ntBASIC2.99□□□□□ -1.93
LSM1O15116 AL136372.1-201ENST00000403060 228 ntBASIC2.99□□□□□ -1.93
LSM1O15116 AL139095.1-201ENST00000404326 391 ntBASIC2.99□□□□□ -1.93
LSM1O15116 PTGES3P2-201ENST00000407942 482 ntBASIC2.99□□□□□ -1.93
LSM1O15116 RNA5SP38-201ENST00000410750 119 ntBASIC2.99□□□□□ -1.93
LSM1O15116 TAF13P2-201ENST00000416876 286 ntBASIC2.99□□□□□ -1.93
LSM1O15116 RPL7P30-201ENST00000420888 709 ntBASIC2.99□□□□□ -1.93
LSM1O15116 AC012497.1-201ENST00000429392 575 ntBASIC2.99□□□□□ -1.93
LSM1O15116 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.99□□□□□ -1.93
LSM1O15116 UBBP3-201ENST00000445497 241 ntBASIC2.99□□□□□ -1.93
LSM1O15116 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.99□□□□□ -1.93
LSM1O15116 RPL23AP31-201ENST00000456160 467 ntBASIC2.99□□□□□ -1.93
LSM1O15116 RPL21P10-201ENST00000463521 490 ntBASIC2.99□□□□□ -1.93
LSM1O15116 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.99□□□□□ -1.93
LSM1O15116 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.99□□□□□ -1.93
LSM1O15116 RN7SL293P-201ENST00000481765 281 ntBASIC2.99□□□□□ -1.93
LSM1O15116 AC110794.1-201ENST00000505816 425 ntBASIC2.99□□□□□ -1.93
LSM1O15116 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.99□□□□□ -1.93
LSM1O15116 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.99□□□□□ -1.93
LSM1O15116 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC2.99□□□□□ -1.93
LSM1O15116 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC2.99□□□□□ -1.93
LSM1O15116 AC093519.1-201ENST00000566109 298 ntBASIC2.99□□□□□ -1.93
LSM1O15116 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.99□□□□□ -1.93
LSM1O15116 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.99□□□□□ -1.93
LSM1O15116 AP000787.2-201ENST00000604432 568 ntBASIC2.99□□□□□ -1.93
LSM1O15116 AC010738.1-201ENST00000604970 987 ntBASIC2.99□□□□□ -1.93
LSM1O15116 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.99□□□□□ -1.93
LSM1O15116 AC006249.1-201ENST00000621223 471 ntBASIC2.99□□□□□ -1.93
LSM1O15116 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
LSM1O15116 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LSM1O15116 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.99□□□□□ -1.93
LSM1O15116 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
LSM1O15116 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.99□□□□□ -1.93
LSM1O15116 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.98□□□□□ -1.93
LSM1O15116 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.98□□□□□ -1.93
LSM1O15116 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.98□□□□□ -1.93
LSM1O15116 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LSM1O15116 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
LSM1O15116 RPL23AP57-201ENST00000332361 466 ntBASIC2.98□□□□□ -1.93
LSM1O15116 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
LSM1O15116 RNU6-1027P-201ENST00000383998 107 ntBASIC2.98□□□□□ -1.93
LSM1O15116 SNORD51-201ENST00000384320 80 ntBASIC2.98□□□□□ -1.93
LSM1O15116 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
LSM1O15116 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.98□□□□□ -1.93
LSM1O15116 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.98□□□□□ -1.93
LSM1O15116 DEFB130D-201ENST00000426866 237 ntBASIC2.98□□□□□ -1.93
LSM1O15116 RAC1P8-201ENST00000427086 527 ntBASIC2.98□□□□□ -1.93
LSM1O15116 MTND4LP10-201ENST00000435146 291 ntBASIC2.98□□□□□ -1.93
LSM1O15116 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.98□□□□□ -1.93
LSM1O15116 AL590762.3-201ENST00000436372 640 ntBASIC2.98□□□□□ -1.93
LSM1O15116 AC000041.1-201ENST00000439655 175 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms