Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.48□□□□□ -1.53
SOX1O00570 SNX18P3-202ENST00000565670 1750 ntBASIC5.48□□□□□ -1.53
SOX1O00570 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SOX1O00570 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC5.48□□□□□ -1.53
SOX1O00570 SNORA73.1-201ENST00000363107 205 ntBASIC5.48□□□□□ -1.53
SOX1O00570 Y_RNA.176-201ENST00000363815 109 ntBASIC5.48□□□□□ -1.53
SOX1O00570 RNA5SP509-201ENST00000364577 119 ntBASIC5.48□□□□□ -1.53
SOX1O00570 RNU6-1040P-201ENST00000383974 107 ntBASIC5.48□□□□□ -1.53
SOX1O00570 RNU6-1293P-201ENST00000384077 107 ntBASIC5.48□□□□□ -1.53
SOX1O00570 SNORA70C-201ENST00000384538 135 ntBASIC5.48□□□□□ -1.53
SOX1O00570 RNU6-601P-201ENST00000384540 107 ntBASIC5.48□□□□□ -1.53
SOX1O00570 AL360182.1-201ENST00000397433 468 ntBASIC5.48□□□□□ -1.53
SOX1O00570 AF186996.5-201ENST00000418098 904 ntBASIC5.48□□□□□ -1.53
SOX1O00570 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.48□□□□□ -1.53
SOX1O00570 AC009965.2-201ENST00000425328 970 ntBASIC5.48□□□□□ -1.53
SOX1O00570 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.48□□□□□ -1.53
SOX1O00570 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.48□□□□□ -1.53
SOX1O00570 RPS29P10-201ENST00000439197 166 ntBASIC5.48□□□□□ -1.53
SOX1O00570 AL031584.1-201ENST00000447169 754 ntBASIC5.48□□□□□ -1.53
SOX1O00570 MTND1P17-201ENST00000448961 204 ntBASIC5.48□□□□□ -1.53
SOX1O00570 CYCSP34-201ENST00000458172 304 ntBASIC5.48□□□□□ -1.53
SOX1O00570 MIR2053-201ENST00000459295 91 ntBASIC5.48□□□□□ -1.53
SOX1O00570 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.48□□□□□ -1.53
SOX1O00570 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.48□□□□□ -1.53
SOX1O00570 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.48□□□□□ -1.53
SOX1O00570 MRPS35P2-201ENST00000508242 191 ntBASIC5.48□□□□□ -1.53
SOX1O00570 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.48□□□□□ -1.53
SOX1O00570 RNU6-1271P-201ENST00000517049 105 ntBASIC5.48□□□□□ -1.53
SOX1O00570 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.48□□□□□ -1.53
SOX1O00570 AC023442.1-201ENST00000531247 422 ntBASIC5.48□□□□□ -1.53
SOX1O00570 AP002404.1-201ENST00000532005 451 ntBASIC5.48□□□□□ -1.53
SOX1O00570 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.48□□□□□ -1.53
SOX1O00570 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.48□□□□□ -1.53
SOX1O00570 MTCO3P23-201ENST00000561363 289 ntBASIC5.48□□□□□ -1.53
SOX1O00570 AC138761.3-201ENST00000579993 334 ntBASIC5.48□□□□□ -1.53
SOX1O00570 RN7SL356P-201ENST00000582228 248 ntBASIC5.48□□□□□ -1.53
SOX1O00570 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.48□□□□□ -1.53
SOX1O00570 AC020910.3-201ENST00000603701 874 ntBASIC5.48□□□□□ -1.53
SOX1O00570 AC005191.1-201ENST00000603950 358 ntBASIC5.48□□□□□ -1.53
SOX1O00570 AL008729.2-201ENST00000606393 473 ntBASIC5.48□□□□□ -1.53
SOX1O00570 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SOX1O00570 RNU6-156P-201ENST00000621869 107 ntBASIC5.48□□□□□ -1.53
SOX1O00570 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SOX1O00570 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
SOX1O00570 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.48□□□□□ -1.53
SOX1O00570 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.48□□□□□ -1.53
SOX1O00570 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SOX1O00570 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SOX1O00570 AC009313.2-201ENST00000417893 1941 ntBASIC5.48□□□□□ -1.53
SOX1O00570 ZNF807-201ENST00000328088 1707 ntBASIC5.48□□□□□ -1.53
SOX1O00570 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SOX1O00570 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.47□□□□□ -1.53
SOX1O00570 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.47□□□□□ -1.53
SOX1O00570 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.47□□□□□ -1.53
SOX1O00570 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.47□□□□□ -1.53
SOX1O00570 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SOX1O00570 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.47□□□□□ -1.53
SOX1O00570 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
SOX1O00570 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX1O00570 AC022164.1-201ENST00000568767 2673 ntBASIC5.47□□□□□ -1.53
SOX1O00570 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.47□□□□□ -1.53
SOX1O00570 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.47□□□□□ -1.53
SOX1O00570 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.47□□□□□ -1.53
SOX1O00570 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SOX1O00570 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
SOX1O00570 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX1O00570 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.47□□□□□ -1.53
SOX1O00570 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
SOX1O00570 SNORD116-11-201ENST00000383882 92 ntBASIC5.47□□□□□ -1.53
SOX1O00570 RNU6-310P-201ENST00000384655 107 ntBASIC5.47□□□□□ -1.53
SOX1O00570 UBE2V1P2-201ENST00000397758 440 ntBASIC5.47□□□□□ -1.53
SOX1O00570 POLHP1-201ENST00000411806 470 ntBASIC5.47□□□□□ -1.53
SOX1O00570 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX1O00570 ATG3P1-201ENST00000419507 911 ntBASIC5.47□□□□□ -1.53
SOX1O00570 AC091390.3-201ENST00000426478 338 ntBASIC5.47□□□□□ -1.53
SOX1O00570 AL031736.2-201ENST00000426573 787 ntBASIC5.47□□□□□ -1.53
SOX1O00570 NRBF2P3-201ENST00000432731 865 ntBASIC5.47□□□□□ -1.53
SOX1O00570 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.47□□□□□ -1.53
SOX1O00570 AC010733.1-201ENST00000451515 401 ntBASIC5.47□□□□□ -1.53
SOX1O00570 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.47□□□□□ -1.53
SOX1O00570 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.47□□□□□ -1.53
SOX1O00570 snoU13.24-201ENST00000458998 104 ntBASIC5.47□□□□□ -1.53
SOX1O00570 U8.20-201ENST00000459445 131 ntBASIC5.47□□□□□ -1.53
SOX1O00570 RN7SL283P-201ENST00000489055 303 ntBASIC5.47□□□□□ -1.53
SOX1O00570 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
SOX1O00570 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.47□□□□□ -1.53
SOX1O00570 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.47□□□□□ -1.53
SOX1O00570 RPS27AP18-201ENST00000515536 459 ntBASIC5.47□□□□□ -1.53
SOX1O00570 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SOX1O00570 MIR4420-201ENST00000583944 77 ntBASIC5.47□□□□□ -1.53
SOX1O00570 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.47□□□□□ -1.53
SOX1O00570 AL669831.4-202ENST00000590817 238 ntBASIC5.47□□□□□ -1.53
SOX1O00570 AL161756.2-201ENST00000604597 246 ntBASIC5.47□□□□□ -1.53
SOX1O00570 AC025034.2-201ENST00000623264 286 ntBASIC5.47□□□□□ -1.53
SOX1O00570 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.47□□□□□ -1.53
SOX1O00570 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX1O00570 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX1O00570 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX1O00570 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SOX1O00570 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms