Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SDCBPO00560 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.13□□□□□ -2.07
SDCBPO00560 ZNF271P-202ENST00000465539 1970 ntBASIC2.12□□□□□ -2.07
SDCBPO00560 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
SDCBPO00560 AL365361.1-201ENST00000566942 3481 ntBASIC2.12□□□□□ -2.07
SDCBPO00560 FRG1BP-201ENST00000278882 761 ntBASIC2.12□□□□□ -2.07
SDCBPO00560 RNU6-761P-201ENST00000384148 107 ntBASIC2.12□□□□□ -2.07
SDCBPO00560 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SDCBPO00560 VTA1P1-201ENST00000414044 866 ntBASIC2.12□□□□□ -2.07
SDCBPO00560 AC080125.1-201ENST00000414888 684 ntBASIC2.12□□□□□ -2.07
SDCBPO00560 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.12□□□□□ -2.07
SDCBPO00560 MTATP6P4-201ENST00000427725 675 ntBASIC2.12□□□□□ -2.07
SDCBPO00560 ARL5AP4-201ENST00000430731 512 ntBASIC2.12□□□□□ -2.07
SDCBPO00560 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.12□□□□□ -2.07
SDCBPO00560 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.12□□□□□ -2.07
SDCBPO00560 AC025750.2-201ENST00000442609 450 ntBASIC2.12□□□□□ -2.07
SDCBPO00560 SNORD109B-201ENST00000458961 67 ntBASIC2.12□□□□□ -2.07
SDCBPO00560 SNORD109A-201ENST00000459128 67 ntBASIC2.12□□□□□ -2.07
SDCBPO00560 AC097462.2-201ENST00000504623 481 ntBASIC2.12□□□□□ -2.07
SDCBPO00560 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SDCBPO00560 AC004062.1-201ENST00000509926 645 ntBASIC2.12□□□□□ -2.07
SDCBPO00560 AC034159.1-201ENST00000513885 583 ntBASIC2.12□□□□□ -2.07
SDCBPO00560 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SDCBPO00560 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.12□□□□□ -2.07
SDCBPO00560 GTF3AP2-201ENST00000557014 266 ntBASIC2.12□□□□□ -2.07
SDCBPO00560 AC090695.1-201ENST00000561269 1222 ntBASIC2.12□□□□□ -2.07
SDCBPO00560 EIF5A2P1-201ENST00000564027 460 ntBASIC2.12□□□□□ -2.07
SDCBPO00560 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.12□□□□□ -2.07
SDCBPO00560 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC2.12□□□□□ -2.07
SDCBPO00560 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.12□□□□□ -2.07
SDCBPO00560 MIR4446-201ENST00000578505 67 ntBASIC2.12□□□□□ -2.07
SDCBPO00560 CBX3P2-202ENST00000583365 535 ntBASIC2.12□□□□□ -2.07
SDCBPO00560 BNIP3P22-201ENST00000593399 556 ntBASIC2.12□□□□□ -2.07
SDCBPO00560 VN1R90P-201ENST00000595717 726 ntBASIC2.12□□□□□ -2.07
SDCBPO00560 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.12□□□□□ -2.07
SDCBPO00560 DUXAP3-201ENST00000603616 594 ntBASIC2.12□□□□□ -2.07
SDCBPO00560 AC005000.2-201ENST00000605468 310 ntBASIC2.12□□□□□ -2.07
SDCBPO00560 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.12□□□□□ -2.07
SDCBPO00560 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.12□□□□□ -2.07
SDCBPO00560 AC006386.2-201ENST00000624491 75 ntBASIC2.12□□□□□ -2.07
SDCBPO00560 AC012005.1-201ENST00000624575 75 ntBASIC2.12□□□□□ -2.07
SDCBPO00560 CYP3A51P-201ENST00000633513 256 ntBASIC2.12□□□□□ -2.07
SDCBPO00560 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.12□□□□□ -2.07
SDCBPO00560 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.12□□□□□ -2.07
SDCBPO00560 AC233263.6-201ENST00000631132 1963 ntBASIC2.12□□□□□ -2.07
SDCBPO00560 AL136520.1-201ENST00000600311 1322 ntBASIC2.12□□□□□ -2.07
SDCBPO00560 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.11□□□□□ -2.07
SDCBPO00560 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SDCBPO00560 OR5J1P-201ENST00000313544 939 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 SNORA14A-201ENST00000364773 135 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
SDCBPO00560 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.11□□□□□ -2.07
SDCBPO00560 RNU6-40P-201ENST00000384254 107 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.11□□□□□ -2.07
SDCBPO00560 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.11□□□□□ -2.07
SDCBPO00560 MTCO2P17-201ENST00000424336 677 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 RPS6P14-201ENST00000425165 719 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.11□□□□□ -2.07
SDCBPO00560 AL513175.1-201ENST00000431492 780 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.11□□□□□ -2.07
SDCBPO00560 AC098826.1-201ENST00000433943 471 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.11□□□□□ -2.07
SDCBPO00560 RPL23AP83-201ENST00000434984 473 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 RPL23AP58-201ENST00000440453 469 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 AC097499.1-201ENST00000444277 208 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.11□□□□□ -2.07
SDCBPO00560 AC009961.3-201ENST00000449832 765 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 RPL23AP15-201ENST00000450202 459 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.11□□□□□ -2.07
SDCBPO00560 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.11□□□□□ -2.07
SDCBPO00560 AL109741.2-201ENST00000455561 343 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 RPS23P3-201ENST00000470993 430 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.11□□□□□ -2.07
SDCBPO00560 AIG1P1-201ENST00000503376 148 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.11□□□□□ -2.07
SDCBPO00560 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.11□□□□□ -2.07
SDCBPO00560 RN7SKP132-201ENST00000516001 208 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 RNA5SP402-201ENST00000517148 110 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.11□□□□□ -2.07
SDCBPO00560 C1DP5-201ENST00000525775 383 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 AC022690.1-201ENST00000526681 550 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
SDCBPO00560 OR5AK3P-201ENST00000527486 1297 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.11□□□□□ -2.07
SDCBPO00560 AL442163.2-201ENST00000553912 710 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.11□□□□□ -2.07
SDCBPO00560 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
SDCBPO00560 ADAM3B-201ENST00000569937 840 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 MIR4504-201ENST00000577413 92 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 LARP7P3-201ENST00000579888 337 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.11□□□□□ -2.07
SDCBPO00560 TPMTP1-201ENST00000592307 737 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 AC092474.3-201ENST00000603022 568 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 AC073387.2-201ENST00000604797 784 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 AL513477.2-201ENST00000607858 568 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 MIR7106-201ENST00000612419 65 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 AC104237.2-201ENST00000612456 443 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 CR589904.2-201ENST00000612533 440 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 AC092608.2-201ENST00000624427 218 ntBASIC2.11□□□□□ -2.07
SDCBPO00560 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms