Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC022795.1-201ENST00000473808 480 ntBASIC2.19□□□□□ -2.06
CACNA1AO00555 MIR1273G-201ENST00000577677 100 ntBASIC2.19□□□□□ -2.06
CACNA1AO00555 FRG1DP-201ENST00000635586 771 ntBASIC2.19□□□□□ -2.06
CACNA1AO00555 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
CACNA1AO00555 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CACNA1AO00555 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
CACNA1AO00555 SNORA46-201ENST00000384762 135 ntBASIC2.18□□□□□ -2.06
CACNA1AO00555 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CACNA1AO00555 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
CACNA1AO00555 RPL32P35-201ENST00000415214 394 ntBASIC2.18□□□□□ -2.06
CACNA1AO00555 VDAC1P3-201ENST00000434069 851 ntBASIC2.18□□□□□ -2.06
CACNA1AO00555 PSPHP1-201ENST00000450062 261 ntBASIC2.18□□□□□ -2.06
CACNA1AO00555 AL445669.2-201ENST00000454425 421 ntBASIC2.18□□□□□ -2.06
CACNA1AO00555 AL583843.1-201ENST00000456070 346 ntBASIC2.18□□□□□ -2.06
CACNA1AO00555 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.18□□□□□ -2.06
CACNA1AO00555 HMGB1P19-201ENST00000517578 577 ntBASIC2.18□□□□□ -2.06
CACNA1AO00555 IGKV2D-23-201ENST00000518179 286 ntBASIC2.18□□□□□ -2.06
CACNA1AO00555 MIR4303-201ENST00000581299 66 ntBASIC2.18□□□□□ -2.06
CACNA1AO00555 AC000123.3-201ENST00000624029 4975 ntBASIC2.18□□□□□ -2.06
CACNA1AO00555 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.18□□□□□ -2.06
CACNA1AO00555 Y_RNA.518-201ENST00000384552 113 ntBASIC2.18□□□□□ -2.06
CACNA1AO00555 BX679664.1-201ENST00000434429 253 ntBASIC2.18□□□□□ -2.06
CACNA1AO00555 PIGFP3-201ENST00000441918 722 ntBASIC2.18□□□□□ -2.06
CACNA1AO00555 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.18□□□□□ -2.06
CACNA1AO00555 RFC5P1-201ENST00000454419 874 ntBASIC2.18□□□□□ -2.06
CACNA1AO00555 snoZ278.1-201ENST00000517059 112 ntBASIC2.18□□□□□ -2.06
CACNA1AO00555 AC103968.1-201ENST00000557841 573 ntBASIC2.18□□□□□ -2.06
CACNA1AO00555 AL356280.1-201ENST00000603614 379 ntBASIC2.18□□□□□ -2.06
CACNA1AO00555 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.18□□□□□ -2.06
CACNA1AO00555 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CACNA1AO00555 AL596275.2-204ENST00000641628 552 ntBASIC2.18□□□□□ -2.06
CACNA1AO00555 AL596275.2-206ENST00000641957 626 ntBASIC2.18□□□□□ -2.06
CACNA1AO00555 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC2.18□□□□□ -2.06
CACNA1AO00555 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CACNA1AO00555 AL353746.1-201ENST00000566293 6881 ntBASIC2.17□□□□□ -2.06
CACNA1AO00555 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CACNA1AO00555 SNORA41-201ENST00000384675 132 ntBASIC2.17□□□□□ -2.06
CACNA1AO00555 AL021407.1-201ENST00000404531 386 ntBASIC2.17□□□□□ -2.06
CACNA1AO00555 SNORA11.4-201ENST00000408823 129 ntBASIC2.17□□□□□ -2.06
CACNA1AO00555 SETP15-201ENST00000412724 337 ntBASIC2.17□□□□□ -2.06
CACNA1AO00555 RPS7P13-201ENST00000413955 498 ntBASIC2.17□□□□□ -2.06
CACNA1AO00555 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.17□□□□□ -2.06
CACNA1AO00555 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.17□□□□□ -2.06
CACNA1AO00555 AC105137.2-201ENST00000569073 466 ntBASIC2.17□□□□□ -2.06
CACNA1AO00555 MIR5007-201ENST00000583098 95 ntBASIC2.17□□□□□ -2.06
CACNA1AO00555 AC243773.3-201ENST00000613270 256 ntBASIC2.17□□□□□ -2.06
CACNA1AO00555 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.17□□□□□ -2.06
CACNA1AO00555 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CACNA1AO00555 AC013404.1-201ENST00000413068 249 ntBASIC2.17□□□□□ -2.06
CACNA1AO00555 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.17□□□□□ -2.06
CACNA1AO00555 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.17□□□□□ -2.06
CACNA1AO00555 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.17□□□□□ -2.06
CACNA1AO00555 AL355836.1-201ENST00000555951 870 ntBASIC2.17□□□□□ -2.06
CACNA1AO00555 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.17□□□□□ -2.06
CACNA1AO00555 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC2.17□□□□□ -2.06
CACNA1AO00555 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC2.17□□□□□ -2.06
CACNA1AO00555 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.17□□□□□ -2.06
CACNA1AO00555 AL137003.2-201ENST00000606924 2538 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 ELL2P4-201ENST00000446870 1376 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CACNA1AO00555 RNU2-2P-201ENST00000410396 191 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 RN7SKP247-201ENST00000411094 308 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.16□□□□□ -2.06
CACNA1AO00555 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.16□□□□□ -2.06
CACNA1AO00555 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.16□□□□□ -2.06
CACNA1AO00555 FABP5P12-201ENST00000515543 389 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 AC087441.2-201ENST00000529141 262 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.16□□□□□ -2.06
CACNA1AO00555 U2.15-201ENST00000611544 191 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 U2.16-201ENST00000613119 191 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 U2.12-201ENST00000613778 191 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 U2.20-201ENST00000613956 192 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 U2.9-201ENST00000615427 191 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 U2.11-201ENST00000616345 191 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 U2.2-201ENST00000616535 191 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 U2.3-201ENST00000617785 191 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 U2.19-201ENST00000618602 191 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 RNU2-1-201ENST00000618664 191 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 U2.6-201ENST00000619225 191 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 U2.5-201ENST00000619465 191 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 U2.10-201ENST00000620268 191 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 NUP58P1-201ENST00000502546 1738 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CACNA1AO00555 SEPT7P7-201ENST00000420492 1301 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.16□□□□□ -2.06
CACNA1AO00555 MIR193B-201ENST00000384907 83 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 RN7SKP200-201ENST00000410564 320 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 TRIAP1P1-201ENST00000427062 225 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.16□□□□□ -2.06
CACNA1AO00555 HMGB1P16-201ENST00000447155 540 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 AL645939.1-201ENST00000453429 797 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 SNORD13-201ENST00000459299 104 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 RN7SKP43-201ENST00000516173 320 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC2.16□□□□□ -2.06
CACNA1AO00555 AC104027.1-201ENST00000521887 300 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.16□□□□□ -2.06
CACNA1AO00555 RN7SL793P-201ENST00000583259 296 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 AC061975.8-201ENST00000587058 721 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 AC136443.5-201ENST00000603741 370 ntBASIC2.16□□□□□ -2.06
CACNA1AO00555 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms