Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.92□□□□□ -2.1
HMGN4O00479 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.92□□□□□ -2.1
HMGN4O00479 MTCO3P11-201ENST00000455103 774 ntBASIC1.92□□□□□ -2.1
HMGN4O00479 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HMGN4O00479 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC1.92□□□□□ -2.1
HMGN4O00479 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.92□□□□□ -2.1
HMGN4O00479 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.92□□□□□ -2.1
HMGN4O00479 AP001317.1-201ENST00000531194 960 ntBASIC1.92□□□□□ -2.1
HMGN4O00479 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.92□□□□□ -2.1
HMGN4O00479 AC002984.1-201ENST00000591692 448 ntBASIC1.92□□□□□ -2.1
HMGN4O00479 AC009314.1-201ENST00000603871 304 ntBASIC1.92□□□□□ -2.1
HMGN4O00479 RPL23AP88-201ENST00000605759 454 ntBASIC1.92□□□□□ -2.1
HMGN4O00479 AL390240.1-201ENST00000612950 384 ntBASIC1.92□□□□□ -2.1
HMGN4O00479 AC010378.1-201ENST00000619270 362 ntBASIC1.92□□□□□ -2.1
HMGN4O00479 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.92□□□□□ -2.1
HMGN4O00479 AC010809.3-201ENST00000621310 641 ntBASIC1.92□□□□□ -2.1
HMGN4O00479 AC116563.2-201ENST00000624751 535 ntBASIC1.92□□□□□ -2.1
HMGN4O00479 FO624990.1-201ENST00000636373 85 ntBASIC1.92□□□□□ -2.1
HMGN4O00479 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
HMGN4O00479 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC1.92□□□□□ -2.1
HMGN4O00479 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HMGN4O00479 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.92□□□□□ -2.1
HMGN4O00479 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HMGN4O00479 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HMGN4O00479 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.91□□□□□ -2.1
HMGN4O00479 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.91□□□□□ -2.1
HMGN4O00479 MTND4P35-201ENST00000604257 1375 ntBASIC1.91□□□□□ -2.1
HMGN4O00479 AC096656.1-201ENST00000623826 1364 ntBASIC1.91□□□□□ -2.1
HMGN4O00479 HMGB3P2-201ENST00000411913 584 ntBASIC1.91□□□□□ -2.1
HMGN4O00479 AL139156.1-201ENST00000412785 841 ntBASIC1.91□□□□□ -2.1
HMGN4O00479 AC013404.1-201ENST00000413068 249 ntBASIC1.91□□□□□ -2.1
HMGN4O00479 AC241520.1-201ENST00000422654 1099 ntBASIC1.91□□□□□ -2.1
HMGN4O00479 AL356320.1-201ENST00000429616 163 ntBASIC1.91□□□□□ -2.1
HMGN4O00479 AC093716.1-201ENST00000435923 377 ntBASIC1.91□□□□□ -2.1
HMGN4O00479 RPL30P11-201ENST00000495304 339 ntBASIC1.91□□□□□ -2.1
HMGN4O00479 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC1.91□□□□□ -2.1
HMGN4O00479 AC104090.1-201ENST00000506341 1171 ntBASIC1.91□□□□□ -2.1
HMGN4O00479 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.91□□□□□ -2.1
HMGN4O00479 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.91□□□□□ -2.1
HMGN4O00479 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.91□□□□□ -2.1
HMGN4O00479 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC1.91□□□□□ -2.1
HMGN4O00479 AP001029.3-201ENST00000588063 596 ntBASIC1.91□□□□□ -2.1
HMGN4O00479 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC1.91□□□□□ -2.1
HMGN4O00479 AC245128.3-201ENST00000594721 748 ntBASIC1.91□□□□□ -2.1
HMGN4O00479 AP003117.1-201ENST00000602771 554 ntBASIC1.91□□□□□ -2.1
HMGN4O00479 AL161912.3-201ENST00000605404 628 ntBASIC1.91□□□□□ -2.1
HMGN4O00479 AC120053.1-201ENST00000607706 736 ntBASIC1.91□□□□□ -2.1
HMGN4O00479 MIR6873-201ENST00000622788 63 ntBASIC1.91□□□□□ -2.1
HMGN4O00479 AL356266.1-201ENST00000623311 483 ntBASIC1.91□□□□□ -2.1
HMGN4O00479 AC092159.4-201ENST00000624944 550 ntBASIC1.91□□□□□ -2.1
HMGN4O00479 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HMGN4O00479 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC1.91□□□□□ -2.1
HMGN4O00479 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HMGN4O00479 AC073055.1-201ENST00000456901 1621 ntBASIC1.91□□□□□ -2.1
HMGN4O00479 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
HMGN4O00479 THUMPD3P1-201ENST00000506556 1480 ntBASIC1.9□□□□□ -2.11
HMGN4O00479 ANKRD36P1-201ENST00000344424 659 ntBASIC1.9□□□□□ -2.11
HMGN4O00479 RNA5SP138-201ENST00000365098 114 ntBASIC1.9□□□□□ -2.11
HMGN4O00479 UBE2V1P2-201ENST00000397758 440 ntBASIC1.9□□□□□ -2.11
HMGN4O00479 AL023284.1-201ENST00000403956 276 ntBASIC1.9□□□□□ -2.11
HMGN4O00479 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC1.9□□□□□ -2.11
HMGN4O00479 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC1.9□□□□□ -2.11
HMGN4O00479 NF1P3-201ENST00000457709 450 ntBASIC1.9□□□□□ -2.11
HMGN4O00479 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HMGN4O00479 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.9□□□□□ -2.11
HMGN4O00479 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC1.9□□□□□ -2.11
HMGN4O00479 IGKV3-31-201ENST00000523109 329 ntBASIC1.9□□□□□ -2.11
HMGN4O00479 HSPE1P20-201ENST00000538133 289 ntBASIC1.9□□□□□ -2.11
HMGN4O00479 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC1.9□□□□□ -2.11
HMGN4O00479 AL355816.1-201ENST00000607951 118 ntBASIC1.9□□□□□ -2.11
HMGN4O00479 CR589904.2-201ENST00000612533 440 ntBASIC1.9□□□□□ -2.11
HMGN4O00479 AL162233.1-201ENST00000620014 944 ntBASIC1.9□□□□□ -2.11
HMGN4O00479 IGHVIII-44-202ENST00000636235 289 ntBASIC1.9□□□□□ -2.11
HMGN4O00479 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.9□□□□□ -2.11
HMGN4O00479 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC1.9□□□□□ -2.11
HMGN4O00479 AL359693.1-201ENST00000614959 2407 ntBASIC1.9□□□□□ -2.11
HMGN4O00479 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.89□□□□□ -2.11
HMGN4O00479 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC1.89□□□□□ -2.11
HMGN4O00479 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HMGN4O00479 SNORA51.11-201ENST00000384442 131 ntBASIC1.89□□□□□ -2.11
HMGN4O00479 MIR1289-1-201ENST00000408836 144 ntBASIC1.89□□□□□ -2.11
HMGN4O00479 RNA5SP492-201ENST00000411330 114 ntBASIC1.89□□□□□ -2.11
HMGN4O00479 RNU2-71P-201ENST00000411395 189 ntBASIC1.89□□□□□ -2.11
HMGN4O00479 MTND1P23-201ENST00000416931 372 ntBASIC1.89□□□□□ -2.11
HMGN4O00479 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC1.89□□□□□ -2.11
HMGN4O00479 USP9YP36-201ENST00000424581 829 ntBASIC1.89□□□□□ -2.11
HMGN4O00479 AC027124.2-201ENST00000428249 105 ntBASIC1.89□□□□□ -2.11
HMGN4O00479 RPL17P49-201ENST00000443728 411 ntBASIC1.89□□□□□ -2.11
HMGN4O00479 CBWD4P-201ENST00000445695 655 ntBASIC1.89□□□□□ -2.11
HMGN4O00479 AC021205.1-201ENST00000468797 348 ntBASIC1.89□□□□□ -2.11
HMGN4O00479 AP000852.1-201ENST00000472460 573 ntBASIC1.89□□□□□ -2.11
HMGN4O00479 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.89□□□□□ -2.11
HMGN4O00479 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.89□□□□□ -2.11
HMGN4O00479 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC1.89□□□□□ -2.11
HMGN4O00479 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
HMGN4O00479 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC1.89□□□□□ -2.11
HMGN4O00479 RNU6-711P-201ENST00000517255 106 ntBASIC1.89□□□□□ -2.11
HMGN4O00479 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.89□□□□□ -2.11
HMGN4O00479 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC1.89□□□□□ -2.11
HMGN4O00479 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms