Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RPL21P17-201ENST00000397467 475 ntBASIC3.26□□□□□ -1.89
PDLIM1O00151 AL357075.1-201ENST00000404107 726 ntBASIC3.26□□□□□ -1.89
PDLIM1O00151 SYF2P2-201ENST00000417620 583 ntBASIC3.26□□□□□ -1.89
PDLIM1O00151 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.26□□□□□ -1.89
PDLIM1O00151 FNDC3CP-201ENST00000420795 1155 ntBASIC3.26□□□□□ -1.89
PDLIM1O00151 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PDLIM1O00151 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.26□□□□□ -1.89
PDLIM1O00151 RPL23AP82-202ENST00000427528 469 ntBASIC3.26□□□□□ -1.89
PDLIM1O00151 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.26□□□□□ -1.89
PDLIM1O00151 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.26□□□□□ -1.89
PDLIM1O00151 RPL39P40-201ENST00000445481 146 ntBASIC3.26□□□□□ -1.89
PDLIM1O00151 RPL7P52-201ENST00000449200 742 ntBASIC3.26□□□□□ -1.89
PDLIM1O00151 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.26□□□□□ -1.89
PDLIM1O00151 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.26□□□□□ -1.89
PDLIM1O00151 CENPBD1P1-201ENST00000464061 469 ntBASIC3.26□□□□□ -1.89
PDLIM1O00151 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PDLIM1O00151 RNU1-95P-201ENST00000516357 160 ntBASIC3.26□□□□□ -1.89
PDLIM1O00151 SNORA67.7-201ENST00000516664 135 ntBASIC3.26□□□□□ -1.89
PDLIM1O00151 RNU1-128P-201ENST00000516704 160 ntBASIC3.26□□□□□ -1.89
PDLIM1O00151 TRMT10BP1-201ENST00000519377 943 ntBASIC3.26□□□□□ -1.89
PDLIM1O00151 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.26□□□□□ -1.89
PDLIM1O00151 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.26□□□□□ -1.89
PDLIM1O00151 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.26□□□□□ -1.89
PDLIM1O00151 AL049838.1-201ENST00000563647 981 ntBASIC3.26□□□□□ -1.89
PDLIM1O00151 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.26□□□□□ -1.89
PDLIM1O00151 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.26□□□□□ -1.89
PDLIM1O00151 MTCO3P13-201ENST00000577757 781 ntBASIC3.26□□□□□ -1.89
PDLIM1O00151 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
PDLIM1O00151 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.26□□□□□ -1.89
PDLIM1O00151 AC245389.1-201ENST00000605141 529 ntBASIC3.26□□□□□ -1.89
PDLIM1O00151 CR392039.5-201ENST00000623201 510 ntBASIC3.26□□□□□ -1.89
PDLIM1O00151 AC006963.1-201ENST00000624003 1052 ntBASIC3.26□□□□□ -1.89
PDLIM1O00151 MTND2P41-201ENST00000637599 773 ntBASIC3.26□□□□□ -1.89
PDLIM1O00151 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.26□□□□□ -1.89
PDLIM1O00151 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.26□□□□□ -1.89
PDLIM1O00151 MTND4P34-201ENST00000572715 1371 ntBASIC3.25□□□□□ -1.89
PDLIM1O00151 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
PDLIM1O00151 CDR1-202ENST00000625883 1485 ntBASIC3.25□□□□□ -1.89
PDLIM1O00151 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
PDLIM1O00151 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
PDLIM1O00151 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
PDLIM1O00151 ARF4P3-201ENST00000397387 509 ntBASIC3.25□□□□□ -1.89
PDLIM1O00151 RPL31P1-201ENST00000398116 372 ntBASIC3.25□□□□□ -1.89
PDLIM1O00151 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PDLIM1O00151 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
PDLIM1O00151 ATP5A1P2-201ENST00000412323 255 ntBASIC3.25□□□□□ -1.89
PDLIM1O00151 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.25□□□□□ -1.89
PDLIM1O00151 AC245054.1-201ENST00000420944 258 ntBASIC3.25□□□□□ -1.89
PDLIM1O00151 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.25□□□□□ -1.89
PDLIM1O00151 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.25□□□□□ -1.89
PDLIM1O00151 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.25□□□□□ -1.89
PDLIM1O00151 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.25□□□□□ -1.89
PDLIM1O00151 OR6K1P-201ENST00000456766 971 ntBASIC3.25□□□□□ -1.89
PDLIM1O00151 RPS20P24-201ENST00000457473 361 ntBASIC3.25□□□□□ -1.89
PDLIM1O00151 SNORA84-201ENST00000459229 133 ntBASIC3.25□□□□□ -1.89
PDLIM1O00151 RN7SL594P-201ENST00000470590 287 ntBASIC3.25□□□□□ -1.89
PDLIM1O00151 AC011979.1-201ENST00000472300 483 ntBASIC3.25□□□□□ -1.89
PDLIM1O00151 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.25□□□□□ -1.89
PDLIM1O00151 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.25□□□□□ -1.89
PDLIM1O00151 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.25□□□□□ -1.89
PDLIM1O00151 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.25□□□□□ -1.89
PDLIM1O00151 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.25□□□□□ -1.89
PDLIM1O00151 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.25□□□□□ -1.89
PDLIM1O00151 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.25□□□□□ -1.89
PDLIM1O00151 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.25□□□□□ -1.89
PDLIM1O00151 AL132857.1-201ENST00000555180 708 ntBASIC3.25□□□□□ -1.89
PDLIM1O00151 AADACP1-206ENST00000561502 1193 ntBASIC3.25□□□□□ -1.89
PDLIM1O00151 AL132657.2-201ENST00000564417 358 ntBASIC3.25□□□□□ -1.89
PDLIM1O00151 MTND1P8-201ENST00000571424 950 ntBASIC3.25□□□□□ -1.89
PDLIM1O00151 MTCO3P24-201ENST00000572729 782 ntBASIC3.25□□□□□ -1.89
PDLIM1O00151 MIR3158-1-201ENST00000583596 81 ntBASIC3.25□□□□□ -1.89
PDLIM1O00151 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.25□□□□□ -1.89
PDLIM1O00151 AL391497.1-201ENST00000608671 547 ntBASIC3.25□□□□□ -1.89
PDLIM1O00151 AC006329.2-201ENST00000611491 394 ntBASIC3.25□□□□□ -1.89
PDLIM1O00151 AC023158.2-201ENST00000614876 543 ntBASIC3.25□□□□□ -1.89
PDLIM1O00151 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PDLIM1O00151 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.25□□□□□ -1.89
PDLIM1O00151 CYP3A51P-201ENST00000633513 256 ntBASIC3.25□□□□□ -1.89
PDLIM1O00151 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PDLIM1O00151 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.25□□□□□ -1.89
PDLIM1O00151 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.25□□□□□ -1.89
PDLIM1O00151 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PDLIM1O00151 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PDLIM1O00151 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PDLIM1O00151 AC004925.1-201ENST00000624256 2706 ntBASIC3.25□□□□□ -1.89
PDLIM1O00151 ZNF285B-201ENST00000561698 1767 ntBASIC3.25□□□□□ -1.89
PDLIM1O00151 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PDLIM1O00151 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PDLIM1O00151 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PDLIM1O00151 AC103988.1-201ENST00000566382 2177 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.24□□□□□ -1.89
PDLIM1O00151 RNU6-989P-201ENST00000362756 107 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 RNU6-216P-201ENST00000363282 104 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 RNA5SP51-201ENST00000364750 119 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
PDLIM1O00151 SNORA5A-201ENST00000384111 134 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 SNORD3H-201ENST00000384486 214 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 MIR506-201ENST00000384998 124 ntBASIC3.24□□□□□ -1.89
PDLIM1O00151 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
PDLIM1O00151 AL590084.1-201ENST00000407885 387 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms