Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AL645937.1-202ENST00000421799 937 ntBASIC2.46□□□□□ -2.02
SMKR1H3BMG3 HMGN2P30-201ENST00000423237 256 ntBASIC2.46□□□□□ -2.02
SMKR1H3BMG3 CCNB1IP1P2-201ENST00000432876 818 ntBASIC2.46□□□□□ -2.02
SMKR1H3BMG3 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.46□□□□□ -2.02
SMKR1H3BMG3 AC091862.1-201ENST00000438016 1100 ntBASIC2.46□□□□□ -2.02
SMKR1H3BMG3 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC2.46□□□□□ -2.02
SMKR1H3BMG3 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC2.46□□□□□ -2.02
SMKR1H3BMG3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.46□□□□□ -2.02
SMKR1H3BMG3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.46□□□□□ -2.02
SMKR1H3BMG3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.46□□□□□ -2.02
SMKR1H3BMG3 TPT1P12-201ENST00000448968 492 ntBASIC2.46□□□□□ -2.02
SMKR1H3BMG3 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC2.46□□□□□ -2.02
SMKR1H3BMG3 AC234775.1-201ENST00000454247 670 ntBASIC2.46□□□□□ -2.02
SMKR1H3BMG3 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.46□□□□□ -2.02
SMKR1H3BMG3 RPS29P33-201ENST00000456717 146 ntBASIC2.46□□□□□ -2.02
SMKR1H3BMG3 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.46□□□□□ -2.02
SMKR1H3BMG3 ARL4AP2-201ENST00000507378 601 ntBASIC2.46□□□□□ -2.02
SMKR1H3BMG3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC2.46□□□□□ -2.02
SMKR1H3BMG3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.46□□□□□ -2.02
SMKR1H3BMG3 AC034205.1-201ENST00000520621 638 ntBASIC2.46□□□□□ -2.02
SMKR1H3BMG3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.46□□□□□ -2.02
SMKR1H3BMG3 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.46□□□□□ -2.02
SMKR1H3BMG3 HIGD1AP1-201ENST00000550979 275 ntBASIC2.46□□□□□ -2.02
SMKR1H3BMG3 HMGB1P14-201ENST00000557424 591 ntBASIC2.46□□□□□ -2.02
SMKR1H3BMG3 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.46□□□□□ -2.02
SMKR1H3BMG3 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.46□□□□□ -2.02
SMKR1H3BMG3 ACTR3BP3-201ENST00000565577 979 ntBASIC2.46□□□□□ -2.02
SMKR1H3BMG3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.46□□□□□ -2.02
SMKR1H3BMG3 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.46□□□□□ -2.02
SMKR1H3BMG3 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC2.46□□□□□ -2.02
SMKR1H3BMG3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC2.46□□□□□ -2.02
SMKR1H3BMG3 MIR5096-201ENST00000583713 70 ntBASIC2.46□□□□□ -2.02
SMKR1H3BMG3 AC006557.5-201ENST00000603126 811 ntBASIC2.46□□□□□ -2.02
SMKR1H3BMG3 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.46□□□□□ -2.02
SMKR1H3BMG3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
SMKR1H3BMG3 OR52H1-202ENST00000641796 1061 ntBASIC2.46□□□□□ -2.02
SMKR1H3BMG3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.46□□□□□ -2.02
SMKR1H3BMG3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 AL121657.1-201ENST00000327215 531 ntBASIC2.45□□□□□ -2.02
SMKR1H3BMG3 RNU5A-1-201ENST00000362698 116 ntBASIC2.45□□□□□ -2.02
SMKR1H3BMG3 RNA5SP197-201ENST00000363357 119 ntBASIC2.45□□□□□ -2.02
SMKR1H3BMG3 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 RPL21P17-201ENST00000397467 475 ntBASIC2.45□□□□□ -2.02
SMKR1H3BMG3 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 GTF2IP3-201ENST00000433887 494 ntBASIC2.45□□□□□ -2.02
SMKR1H3BMG3 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 AC090774.1-201ENST00000435925 246 ntBASIC2.45□□□□□ -2.02
SMKR1H3BMG3 LSM1P1-201ENST00000438629 273 ntBASIC2.45□□□□□ -2.02
SMKR1H3BMG3 HMGB3P6-201ENST00000444896 598 ntBASIC2.45□□□□□ -2.02
SMKR1H3BMG3 AC115115.1-201ENST00000449927 248 ntBASIC2.45□□□□□ -2.02
SMKR1H3BMG3 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 RPS7P7-201ENST00000463499 571 ntBASIC2.45□□□□□ -2.02
SMKR1H3BMG3 RN7SL601P-201ENST00000471221 293 ntBASIC2.45□□□□□ -2.02
SMKR1H3BMG3 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 HSPE1P6-201ENST00000479457 291 ntBASIC2.45□□□□□ -2.02
SMKR1H3BMG3 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 MTCYBP17-201ENST00000503579 789 ntBASIC2.45□□□□□ -2.02
SMKR1H3BMG3 AC112198.1-201ENST00000505369 1220 ntBASIC2.45□□□□□ -2.02
SMKR1H3BMG3 AC113347.3-201ENST00000509113 148 ntBASIC2.45□□□□□ -2.02
SMKR1H3BMG3 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 RNA5SP217-201ENST00000515959 91 ntBASIC2.45□□□□□ -2.02
SMKR1H3BMG3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 OR5G4P-201ENST00000525251 760 ntBASIC2.45□□□□□ -2.02
SMKR1H3BMG3 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 CYCSP30-201ENST00000546447 172 ntBASIC2.45□□□□□ -2.02
SMKR1H3BMG3 AC025884.1-201ENST00000556034 378 ntBASIC2.45□□□□□ -2.02
SMKR1H3BMG3 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 AL590099.1-201ENST00000615276 138 ntBASIC2.45□□□□□ -2.02
SMKR1H3BMG3 AC006213.4-201ENST00000616184 634 ntBASIC2.45□□□□□ -2.02
SMKR1H3BMG3 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 AC069209.1-201ENST00000619282 651 ntBASIC2.45□□□□□ -2.02
SMKR1H3BMG3 MIR6130-201ENST00000619419 109 ntBASIC2.45□□□□□ -2.02
SMKR1H3BMG3 AC123767.1-202ENST00000620407 817 ntBASIC2.45□□□□□ -2.02
SMKR1H3BMG3 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 AC104985.3-201ENST00000623479 597 ntBASIC2.45□□□□□ -2.02
SMKR1H3BMG3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 AC017071.1-201ENST00000564407 2204 ntBASIC2.45□□□□□ -2.02
SMKR1H3BMG3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
SMKR1H3BMG3 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SMKR1H3BMG3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
SMKR1H3BMG3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.44□□□□□ -2.02
SMKR1H3BMG3 AC005832.2-201ENST00000538921 1430 ntBASIC2.44□□□□□ -2.02
SMKR1H3BMG3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.44□□□□□ -2.02
SMKR1H3BMG3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms