Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AL158071.1-201ENST00000430315 461 ntBASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 MTCO2P20-201ENST00000437339 673 ntBASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 AL671855.1-201ENST00000446875 1203 ntBASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 MTCO2P25-201ENST00000447065 681 ntBASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 Z73417.1-201ENST00000447373 778 ntBASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 AP000873.1-201ENST00000463987 400 ntBASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 RPL23AP14-201ENST00000468281 468 ntBASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 SNRPGP3-201ENST00000469405 227 ntBASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 MTCO1P30-201ENST00000515244 580 ntBASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 HIGD1AP17-201ENST00000554576 276 ntBASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 LARP7P2-201ENST00000575306 125 ntBASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 MIR5004-201ENST00000579078 107 ntBASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 MIR4738-201ENST00000579134 87 ntBASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 AL009028.1-201ENST00000604895 802 ntBASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 AL451074.6-201ENST00000608512 729 ntBASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 SEPT7P7-201ENST00000420492 1301 ntBASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 AL353743.1-202ENST00000431724 1695 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 AC091152.2-201ENST00000591628 2569 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 SNRPEP3-201ENST00000338402 276 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 RNU1-70P-201ENST00000362618 164 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 Y_RNA.465-201ENST00000384293 102 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 AC016769.3-201ENST00000396562 315 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 NDUFB4P4-201ENST00000404822 243 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 AL355379.1-201ENST00000405542 640 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 AL356968.1-201ENST00000416622 474 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 AL513174.1-201ENST00000423182 629 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 ATP5F1P1-201ENST00000433775 569 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 CKS1BP5-201ENST00000434172 273 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 AC127537.2-201ENST00000439258 465 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 SLC31A1P1-201ENST00000451221 567 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 OR5H5P-201ENST00000503164 928 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 HMGB1P28-201ENST00000507778 552 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 AC079395.1-201ENST00000510981 262 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 ARL2BPP6-201ENST00000512757 439 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 Vault.1-201ENST00000516474 102 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 MRPS36P3-201ENST00000519284 130 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 AL139174.1-201ENST00000531489 886 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 AC004024.1-201ENST00000549244 247 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 RPL21P12-201ENST00000559810 515 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 AF131215.7-201ENST00000602443 707 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 AL365503.1-201ENST00000605247 905 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 AC013244.3-201ENST00000605614 388 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 AL157817.1-201ENST00000614264 790 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 XIST_intron.1-201ENST00000619444 68 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 AC026422.1-201ENST00000623961 452 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 AC005183.1-201ENST00000603687 1979 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 AC010733.2-201ENST00000589496 5702 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 AL021368.2-201ENST00000606125 5352 ntBASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NEDD8-MDP1E9PL57 CDR1-202ENST00000625883 1485 ntBASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
NEDD8-MDP1E9PL57 ZNF734P-201ENST00000419494 1534 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms