Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 SNORA11.3-201ENST00000408471 128 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 RNU2-9P-201ENST00000410194 145 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.91□□□□□ -1.78
CGB1A6NKQ9 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.91□□□□□ -1.78
CGB1A6NKQ9 EIF4HP2-201ENST00000424380 563 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 CKS1BP6-201ENST00000424932 240 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC3.91□□□□□ -1.78
CGB1A6NKQ9 ELOCP18-201ENST00000434209 337 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.91□□□□□ -1.78
CGB1A6NKQ9 HMGB1P18-201ENST00000438801 619 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 AL163193.1-201ENST00000444895 788 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 SNORD19B-201ENST00000459623 84 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 MTCO2P29-201ENST00000465212 189 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 RPS26P39-201ENST00000469206 341 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 COX6B1P5-201ENST00000509843 249 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 RNU6-1170P-201ENST00000515974 106 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 Y_RNA.691-201ENST00000516611 103 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.91□□□□□ -1.78
CGB1A6NKQ9 RAD21-204ENST00000518055 896 ntTSL 2 BASIC3.91□□□□□ -1.78
CGB1A6NKQ9 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.91□□□□□ -1.78
CGB1A6NKQ9 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.91□□□□□ -1.78
CGB1A6NKQ9 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC3.91□□□□□ -1.78
CGB1A6NKQ9 MIR4472-2-201ENST00000582069 67 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 MIR4691-201ENST00000583764 85 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 MIR3171-201ENST00000584270 74 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 RN7SL435P-201ENST00000584418 282 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC3.91□□□□□ -1.78
CGB1A6NKQ9 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC3.91□□□□□ -1.78
CGB1A6NKQ9 RPL23AP92-201ENST00000603609 255 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 AC106900.2-201ENST00000604994 317 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.91□□□□□ -1.78
CGB1A6NKQ9 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CGB1A6NKQ9 AC022467.1-201ENST00000614738 749 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC3.91□□□□□ -1.78
CGB1A6NKQ9 SNORA11.6-201ENST00000619030 128 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 AL022401.1-201ENST00000619498 108 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 AC105074.1-201ENST00000623380 3095 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 AC091953.2-201ENST00000623979 160 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.91□□□□□ -1.78
CGB1A6NKQ9 AL133412.1-201ENST00000380194 2992 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CGB1A6NKQ9 HSPA8P18-201ENST00000439846 1928 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 OR4G1P-203ENST00000641984 1631 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CGB1A6NKQ9 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC3.91□□□□□ -1.78
CGB1A6NKQ9 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC3.9□□□□□ -1.78
CGB1A6NKQ9 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC3.9□□□□□ -1.78
CGB1A6NKQ9 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CGB1A6NKQ9 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC3.9□□□□□ -1.78
CGB1A6NKQ9 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
CGB1A6NKQ9 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.78
CGB1A6NKQ9 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CGB1A6NKQ9 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CGB1A6NKQ9 THAP12P4-201ENST00000528321 2266 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CGB1A6NKQ9 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CGB1A6NKQ9 RPL23P2-201ENST00000320371 421 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 RNU6-254P-201ENST00000363377 107 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 Y_RNA.144-201ENST00000363521 113 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 Y_RNA.184-201ENST00000363884 108 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 RNU4-1-201ENST00000363925 141 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 RNU6-853P-201ENST00000364306 107 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 RNVU1-3-201ENST00000364313 161 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 RNA5SP428-201ENST00000365129 132 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 RNU6-169P-201ENST00000365336 107 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
CGB1A6NKQ9 UBBP2-201ENST00000376781 231 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 MIR559-201ENST00000385188 96 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 MT-TC-201ENST00000387405 66 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CGB1A6NKQ9 EIF5P1-201ENST00000400019 1231 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 RNA5SP345-201ENST00000410646 108 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.9□□□□□ -1.79
CGB1A6NKQ9 AF186996.5-201ENST00000418098 904 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 AC069213.2-201ENST00000420238 366 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 RPL36AP10-201ENST00000421785 322 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 MTCYBP8-201ENST00000422855 651 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC3.9□□□□□ -1.79
CGB1A6NKQ9 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.9□□□□□ -1.79
CGB1A6NKQ9 RPS27P18-201ENST00000431701 247 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.9□□□□□ -1.79
CGB1A6NKQ9 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.9□□□□□ -1.79
CGB1A6NKQ9 RPL23AP74-201ENST00000437246 471 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 MTND3P2-201ENST00000438452 342 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.9□□□□□ -1.79
CGB1A6NKQ9 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.9□□□□□ -1.79
CGB1A6NKQ9 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.9□□□□□ -1.79
CGB1A6NKQ9 AC104651.2-201ENST00000447549 528 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 SLC25A18P1-201ENST00000449385 454 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 AL645939.1-201ENST00000453429 797 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 AP1S2P1-201ENST00000457344 379 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 AL136126.1-201ENST00000473603 402 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 S100A11P1-201ENST00000477525 312 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 AC233702.1-201ENST00000482905 502 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC3.9□□□□□ -1.79
CGB1A6NKQ9 AC011005.3-201ENST00000491624 395 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 EIF4EP3-201ENST00000498782 656 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 HIGD1AP14-201ENST00000507617 282 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 MRPS33P2-201ENST00000507850 322 ntBASIC3.9□□□□□ -1.79
CGB1A6NKQ9 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms