Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 AL590103.1-201ENST00000434488 307 ntBASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 RPL23AP16-201ENST00000441715 421 ntBASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 FGF7P5-201ENST00000441829 291 ntBASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 USP9YP17-201ENST00000444617 696 ntBASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 COX6CP18-201ENST00000448769 222 ntBASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 MTCO3P2-201ENST00000457365 171 ntBASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 AC010301.1-201ENST00000473936 355 ntBASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 AC004062.1-201ENST00000509926 645 ntBASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 AC109471.1-201ENST00000511631 612 ntBASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 RNA5SP468-201ENST00000516782 93 ntBASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 UBE2NP1-201ENST00000545592 458 ntBASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 AL121603.1-201ENST00000553815 142 ntBASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 AC092354.2-201ENST00000607786 514 ntBASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 XIST_intron.1-201ENST00000619444 68 ntBASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 AC092650.2-201ENST00000619984 902 ntBASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 AC019226.2-201ENST00000625973 424 ntBASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 CU459211.1-201ENST00000635667 749 ntBASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 MTND2P41-201ENST00000637599 773 ntBASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 AC091152.2-201ENST00000591628 2569 ntBASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 AC138915.3-201ENST00000562908 1389 ntBASIC3.51□□□□□ -1.85
TRIM49BA6NDI0 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 RNA5SP258-201ENST00000362750 119 ntBASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 DEFB109C-201ENST00000382575 264 ntBASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 DEFB109B-201ENST00000382656 264 ntBASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 Y_RNA.408-201ENST00000383987 102 ntBASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 AL357075.1-201ENST00000404107 726 ntBASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 FNDC3CP-201ENST00000420795 1155 ntBASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 AC005019.1-201ENST00000436455 431 ntBASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 Z75741.1-201ENST00000446793 314 ntBASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 AC112492.1-201ENST00000449607 712 ntBASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 PRSS3P4-201ENST00000453323 162 ntBASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 snoU13.4-201ENST00000458916 104 ntBASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 RNU6-311P-201ENST00000516224 102 ntBASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 snoZ278.1-201ENST00000517059 112 ntBASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 HIGD1AP10-201ENST00000527837 282 ntBASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 DUXAP5-201ENST00000529668 529 ntBASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 AC245036.5-201ENST00000596330 847 ntBASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 AL035411.2-201ENST00000604022 421 ntBASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 AC073657.2-201ENST00000605661 303 ntBASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 AP005137.2-201ENST00000609238 400 ntBASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 AC024257.5-201ENST00000612739 531 ntBASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 AC084757.4-201ENST00000616350 526 ntBASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 AL049781.1-201ENST00000623195 3585 ntBASIC3.5□□□□□ -1.85
TRIM49BA6NDI0 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 RNU6-989P-201ENST00000362756 107 ntBASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 RNU4-68P-201ENST00000364314 141 ntBASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 MIR183-201ENST00000384958 110 ntBASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 AL139098.1-201ENST00000407291 389 ntBASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 AC007899.1-201ENST00000412776 775 ntBASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 AC009237.5-201ENST00000414271 501 ntBASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 HMGB3P23-201ENST00000414981 585 ntBASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 RPL32P35-201ENST00000415214 394 ntBASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 HIGD1AP15-201ENST00000416198 280 ntBASIC3.49□□□□□ -1.85
TRIM49BA6NDI0 OR4K6P-201ENST00000416478 897 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms