Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.16□□□□□ -1.74
TCRBV5S1A1TA0A578 CKS1BP3-201ENST00000600888 237 ntBASIC4.16□□□□□ -1.74
TCRBV5S1A1TA0A578 AC004067.1-201ENST00000608733 700 ntBASIC4.16□□□□□ -1.74
TCRBV5S1A1TA0A578 MIR378J-201ENST00000611988 109 ntBASIC4.16□□□□□ -1.74
TCRBV5S1A1TA0A578 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.16□□□□□ -1.74
TCRBV5S1A1TA0A578 CYP3A51P-201ENST00000633513 256 ntBASIC4.16□□□□□ -1.74
TCRBV5S1A1TA0A578 MIR3688-2-201ENST00000636963 87 ntBASIC4.16□□□□□ -1.74
TCRBV5S1A1TA0A578 FAM157B-203ENST00000639350 358 ntBASIC4.16□□□□□ -1.74
TCRBV5S1A1TA0A578 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.16□□□□□ -1.74
TCRBV5S1A1TA0A578 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
TCRBV5S1A1TA0A578 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.16□□□□□ -1.74
TCRBV5S1A1TA0A578 BDP1P-201ENST00000582658 1990 ntBASIC4.16□□□□□ -1.74
TCRBV5S1A1TA0A578 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TCRBV5S1A1TA0A578 AC027228.2-201ENST00000567141 2154 ntBASIC4.16□□□□□ -1.74
TCRBV5S1A1TA0A578 RLIMP1-201ENST00000339626 1680 ntBASIC4.16□□□□□ -1.74
TCRBV5S1A1TA0A578 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TCRBV5S1A1TA0A578 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
TCRBV5S1A1TA0A578 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TCRBV5S1A1TA0A578 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TCRBV5S1A1TA0A578 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.15□□□□□ -1.74
TCRBV5S1A1TA0A578 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
TCRBV5S1A1TA0A578 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.15□□□□□ -1.74
TCRBV5S1A1TA0A578 AC130650.2-201ENST00000618736 2403 ntBASIC4.15□□□□□ -1.74
TCRBV5S1A1TA0A578 IPO8P1-201ENST00000455509 3109 ntBASIC4.15□□□□□ -1.74
TCRBV5S1A1TA0A578 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.15□□□□□ -1.74
TCRBV5S1A1TA0A578 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.15□□□□□ -1.74
TCRBV5S1A1TA0A578 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
TCRBV5S1A1TA0A578 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
TCRBV5S1A1TA0A578 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
TCRBV5S1A1TA0A578 RPL32P3-201ENST00000359025 275 ntBASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 Y_RNA.256-201ENST00000364594 104 ntBASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 Y_RNA.453-201ENST00000384223 109 ntBASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 RNU6-1226P-201ENST00000384317 107 ntBASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 AL022722.2-201ENST00000402519 180 ntBASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 RPS20P2-201ENST00000402520 389 ntBASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 RPL31P52-201ENST00000407532 367 ntBASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 EIF4A1P3-201ENST00000411521 244 ntBASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 AC073136.2-201ENST00000417282 849 ntBASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 ISCA1P6-201ENST00000427740 390 ntBASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 AL358934.1-201ENST00000432346 324 ntBASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 AC112653.1-201ENST00000443851 386 ntBASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 MTCO3P20-201ENST00000454926 688 ntBASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 AP001025.2-201ENST00000490908 477 ntBASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 HMGB1P29-201ENST00000505659 499 ntBASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 AP003122.4-201ENST00000530980 758 ntBASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 HMGN1P30-201ENST00000589286 268 ntBASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 DUXAP4-201ENST00000603046 613 ntBASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 RPL23AP92-201ENST00000603609 255 ntBASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 AL590392.1-201ENST00000604960 446 ntBASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 RNU6-87P-201ENST00000607561 108 ntBASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 BX323046.1-201ENST00000610145 535 ntBASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 AL590282.1-201ENST00000610379 1136 ntBASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 AL359880.1-201ENST00000621879 266 ntBASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TCRBV5S1A1TA0A578 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TCRBV5S1A1TA0A578 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TCRBV5S1A1TA0A578 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TCRBV5S1A1TA0A578 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.14□□□□□ -1.75
TCRBV5S1A1TA0A578 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.14□□□□□ -1.75
TCRBV5S1A1TA0A578 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.14□□□□□ -1.75
TCRBV5S1A1TA0A578 RNU6-744P-201ENST00000365557 107 ntBASIC4.14□□□□□ -1.75
TCRBV5S1A1TA0A578 Y_RNA.390-201ENST00000383932 102 ntBASIC4.14□□□□□ -1.75
TCRBV5S1A1TA0A578 RNU6-1316P-201ENST00000384242 108 ntBASIC4.14□□□□□ -1.75
TCRBV5S1A1TA0A578 SSXP10-201ENST00000402595 565 ntBASIC4.14□□□□□ -1.75
TCRBV5S1A1TA0A578 CCNG1P1-201ENST00000406783 885 ntBASIC4.14□□□□□ -1.75
TCRBV5S1A1TA0A578 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.14□□□□□ -1.75
TCRBV5S1A1TA0A578 USP9YP6-201ENST00000413550 854 ntBASIC4.14□□□□□ -1.75
TCRBV5S1A1TA0A578 MTCYBP24-201ENST00000420387 1106 ntBASIC4.14□□□□□ -1.75
TCRBV5S1A1TA0A578 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
TCRBV5S1A1TA0A578 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.14□□□□□ -1.75
TCRBV5S1A1TA0A578 FCF1P1-201ENST00000432690 571 ntBASIC4.14□□□□□ -1.75
TCRBV5S1A1TA0A578 AL451074.3-201ENST00000437709 472 ntBASIC4.14□□□□□ -1.75
TCRBV5S1A1TA0A578 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.14□□□□□ -1.75
TCRBV5S1A1TA0A578 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.14□□□□□ -1.75
TCRBV5S1A1TA0A578 AC105402.2-201ENST00000438503 358 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms