Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AL590399.6-201ENST00000446396 307 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 RPL7P52-201ENST00000449200 742 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 Z82190.1-201ENST00000454534 490 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 snoU109.4-201ENST00000458953 143 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 RN7SL93P-201ENST00000463035 293 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 TRBV12-2-201ENST00000489763 344 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 AC023424.2-201ENST00000493479 777 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 AC113430.1-201ENST00000506872 718 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 RNU6-714P-201ENST00000516963 103 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 MIR3939-201ENST00000582614 106 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 AC009977.1-201ENST00000586015 570 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 AL365503.1-201ENST00000605247 905 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 MIR6867-201ENST00000610636 67 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 AP001506.1-201ENST00000615444 211 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 AL139089.1-201ENST00000620372 975 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 AC079684.1-201ENST00000621405 437 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 CR381572.1-201ENST00000625098 102 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 AC099654.13-201ENST00000639774 207 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 AC027287.1-201ENST00000553115 1453 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 Z73965.1-201ENST00000623412 2297 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 AC006504.1-201ENST00000562493 3666 ntBASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 Y_RNA.3-201ENST00000362331 103 ntBASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 RNU4-44P-201ENST00000363050 141 ntBASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 SNORD51-201ENST00000384320 80 ntBASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 MIR937-201ENST00000401271 86 ntBASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 AL356095.1-201ENST00000417217 199 ntBASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 RPL36AP36-201ENST00000418616 301 ntBASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 AC244505.5-201ENST00000443639 207 ntBASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 AL353691.1-201ENST00000451332 387 ntBASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 snoU13.8-201ENST00000458890 104 ntBASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 ACTR3P3-201ENST00000480448 893 ntBASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 COX7A2P2-201ENST00000505291 250 ntBASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 RPL37P25-201ENST00000507308 276 ntBASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 RN7SKP298-201ENST00000515950 94 ntBASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 RNA5SP208-201ENST00000516156 78 ntBASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 RNU6-201P-201ENST00000517100 61 ntBASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 AP003467.2-201ENST00000520175 319 ntBASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 AP003392.2-201ENST00000527269 208 ntBASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 DYNLL1P4-201ENST00000549314 266 ntBASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 AC025884.1-201ENST00000556034 378 ntBASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 ZNF519P3-201ENST00000557158 1032 ntBASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 AC009101.1-201ENST00000568135 242 ntBASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 MIR4458-201ENST00000578872 75 ntBASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 AL359999.1-201ENST00000604513 294 ntBASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 AC006566.1-201ENST00000608943 513 ntBASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 AC099669.2-201ENST00000616549 437 ntBASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 AC091925.2-201ENST00000625059 256 ntBASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 MIR6715B-201ENST00000637172 77 ntBASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.95□□□□□ -1.78
TCRBV7S3A2A0A539 RLIMP1-201ENST00000339626 1680 ntBASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 197.5 ms