Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TNFRSF11AQ9Y6Q6 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.82□□□□□ -1.48
TNFRSF11AQ9Y6Q6 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.82□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AC004817.2-201ENST00000561794 651 ntBASIC5.82□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.82□□□□□ -1.48
TNFRSF11AQ9Y6Q6 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TNFRSF11AQ9Y6Q6 MIR4424-201ENST00000585257 86 ntBASIC5.82□□□□□ -1.48
TNFRSF11AQ9Y6Q6 MTCO1P7-201ENST00000419523 1542 ntBASIC5.82□□□□□ -1.48
TNFRSF11AQ9Y6Q6 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.82□□□□□ -1.48
TNFRSF11AQ9Y6Q6 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TNFRSF11AQ9Y6Q6 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.82□□□□□ -1.48
TNFRSF11AQ9Y6Q6 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TNFRSF11AQ9Y6Q6 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AP001284.1-201ENST00000528393 2118 ntBASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AC067945.1-201ENST00000342609 618 ntBASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 RNA5SP332-201ENST00000391063 115 ntBASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 RNU6-903P-201ENST00000391270 109 ntBASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 GLULP6-201ENST00000399502 913 ntBASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AL606923.1-201ENST00000406616 190 ntBASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 U3.35-201ENST00000408405 208 ntBASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AC074085.1-201ENST00000413598 418 ntBASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 RPL36AP36-201ENST00000418616 301 ntBASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 CKS1BP6-201ENST00000424932 240 ntBASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 RPEP3-201ENST00000425462 676 ntBASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AL451139.1-201ENST00000434718 346 ntBASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 SNRPEP4-201ENST00000435815 279 ntBASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AF228730.2-201ENST00000438784 848 ntBASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 MIR4675-201ENST00000577898 77 ntBASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AL159972.1-201ENST00000625150 448 ntBASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
TNFRSF11AQ9Y6Q6 MTND4P14-201ENST00000435799 1354 ntBASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AC066616.2-201ENST00000559334 1481 ntBASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 RNU6-522P-201ENST00000364497 107 ntBASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 RNY3P13-201ENST00000365542 102 ntBASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 RNU4-20P-201ENST00000365601 151 ntBASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 RNU6-196P-201ENST00000384315 107 ntBASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 RNU6-1105P-201ENST00000384774 107 ntBASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AL359643.1-201ENST00000404109 423 ntBASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AC245054.2-201ENST00000415639 319 ntBASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 TDGF1P1-201ENST00000445734 527 ntBASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AC079804.1-201ENST00000461922 436 ntBASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 VN1R17P-201ENST00000472048 1090 ntBASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AC093767.1-201ENST00000504523 156 ntBASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AC021146.2-201ENST00000504736 556 ntBASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 Y_RNA.720-201ENST00000517166 92 ntBASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.8□□□□□ -1.48
TNFRSF11AQ9Y6Q6 MIR4775-201ENST00000581168 75 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms