Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 RNVU1-6-201ENST00000364688 164 ntBASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 RNA5SP90-201ENST00000364801 99 ntBASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 RNU6-1040P-201ENST00000383974 107 ntBASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 UBE2V1P2-201ENST00000397758 440 ntBASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 MED13P1-201ENST00000428342 171 ntBASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 AL669831.1-202ENST00000428504 417 ntBASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 UBE2V1P13-201ENST00000436983 439 ntBASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 RPL21P23-201ENST00000446654 460 ntBASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 CEACAMP4-201ENST00000457676 421 ntBASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 AC004801.2-202ENST00000463559 283 ntBASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 AC008897.1-201ENST00000494006 347 ntBASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 Y_RNA.654-201ENST00000497848 106 ntBASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 OR7H2P-201ENST00000513483 306 ntBASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 RNA5SP230-201ENST00000517039 122 ntBASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 AC011979.2-201ENST00000527568 352 ntBASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 AP000857.1-201ENST00000532151 543 ntBASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 MIR4660-201ENST00000583549 74 ntBASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 AC011477.5-201ENST00000586571 259 ntBASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 MIR378J-201ENST00000611988 109 ntBASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 FAM157A-202ENST00000615155 405 ntBASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 U6.114-201ENST00000636407 96 ntBASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 PNPT1P2-201ENST00000456768 2050 ntBASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 API5P2-201ENST00000397055 1498 ntBASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNX11Q9Y5W9 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 MTND5P30-201ENST00000452896 1731 ntBASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 AL442128.2-201ENST00000620246 1824 ntBASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 U3.11-201ENST00000364476 212 ntBASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 Y_RNA.574-201ENST00000384766 95 ntBASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 MIR192-201ENST00000384915 110 ntBASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 SOD2P1-201ENST00000396543 562 ntBASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 AL024474.1-201ENST00000404655 591 ntBASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 RNU4-61P-201ENST00000411243 107 ntBASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 RNU6-954P-201ENST00000411355 107 ntBASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 VDAC1P9-201ENST00000412766 841 ntBASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 RPL34P20-201ENST00000442771 351 ntBASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 AL136126.1-201ENST00000473603 402 ntBASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 AC140172.1-201ENST00000502928 141 ntBASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 AL359219.2-201ENST00000555184 348 ntBASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 HMGN2P47-201ENST00000559378 272 ntBASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 AC244107.2-201ENST00000611773 76 ntBASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 AC092608.2-201ENST00000624427 218 ntBASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 AL669831.3-213ENST00000636676 183 ntBASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 AL022311.1-201ENST00000623726 19416 ntBASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 AC097714.1-201ENST00000511272 1647 ntBASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SNX11Q9Y5W9 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNX11Q9Y5W9 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
SNX11Q9Y5W9 MAPK10-338ENST00000641647 3362 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms