Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 RNU2-50P-201ENST00000410494 143 ntBASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 RN7SKP206-201ENST00000410823 293 ntBASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 AC092809.3-201ENST00000415453 231 ntBASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 AL391987.1-201ENST00000441025 200 ntBASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 RPL7P23-201ENST00000493874 747 ntBASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 NDUFB5P1-201ENST00000508134 564 ntBASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 AC011411.1-201ENST00000509592 876 ntBASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 AC022080.3-201ENST00000544433 482 ntBASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 AC068446.3-201ENST00000555285 382 ntBASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 AC020916.2-201ENST00000591242 360 ntBASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 AC116447.1-201ENST00000613153 453 ntBASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 AC004792.1-201ENST00000614523 137 ntBASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 MIR6130-201ENST00000619419 109 ntBASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
HRH3Q9Y5N1 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HRH3Q9Y5N1 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.59□□□□□ -1.52
HRH3Q9Y5N1 AC010266.2-201ENST00000564741 3255 ntBASIC5.59□□□□□ -1.52
HRH3Q9Y5N1 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
HRH3Q9Y5N1 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.59□□□□□ -1.52
HRH3Q9Y5N1 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HRH3Q9Y5N1 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 AC097461.1-201ENST00000568928 2821 ntBASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 AC109446.4-201ENST00000623235 2755 ntBASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 RBMY1HP-201ENST00000382759 1389 ntBASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 RNU1-134P-201ENST00000362935 165 ntBASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 Y_RNA.183-201ENST00000363882 113 ntBASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 RNA5SP510-201ENST00000364697 99 ntBASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 AL030996.1-201ENST00000411430 235 ntBASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 AC007098.1-201ENST00000420122 367 ntBASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 CYCSP51-201ENST00000443545 318 ntBASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 CEACAMP6-201ENST00000452007 574 ntBASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 AL138752.1-201ENST00000452964 351 ntBASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 Z92846.1-201ENST00000456203 268 ntBASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 LINC01399-202ENST00000458450 244 ntBASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 AC090958.1-201ENST00000511122 351 ntBASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 RNA5SP438-201ENST00000516561 112 ntBASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 AC127381.1-201ENST00000555979 939 ntBASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 AC007494.1-201ENST00000562293 760 ntBASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 AC009852.2-201ENST00000567898 485 ntBASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 MIR3910-1-201ENST00000580936 111 ntBASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 AL713866.2-201ENST00000603579 219 ntBASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 AC104687.2-201ENST00000604442 342 ntBASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 AC010201.1-201ENST00000605051 540 ntBASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 AC141002.1-201ENST00000607025 279 ntBASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 AC006023.2-201ENST00000609916 167 ntBASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 RNA5SP439-201ENST00000617595 124 ntBASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HRH3Q9Y5N1 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms