Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 AC138393.1-203ENST00000327086 343 ntBASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 AL121886.1-201ENST00000358609 435 ntBASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 RNU6-1329P-201ENST00000365664 107 ntBASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 Y_RNA.396-201ENST00000383949 103 ntBASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 SNORA51.9-201ENST00000384295 124 ntBASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 PGBD4P6-201ENST00000421501 610 ntBASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 MRPS18CP6-201ENST00000423587 223 ntBASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 RPL7L1P1-201ENST00000448259 785 ntBASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 AC005077.1-201ENST00000449226 375 ntBASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 AC098847.1-201ENST00000473094 348 ntBASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 RPL38P3-201ENST00000484463 213 ntBASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 RPL17P19-201ENST00000489069 552 ntBASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 MIR2117-201ENST00000516780 80 ntBASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 CDH12P4-201ENST00000517835 295 ntBASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 CDH12P3-201ENST00000517935 295 ntBASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 CDH12P1-201ENST00000518435 295 ntBASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 ERHP1-201ENST00000523006 310 ntBASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 OR4H12P-201ENST00000556269 907 ntBASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 AC004805.2-201ENST00000605382 482 ntBASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 AL136131.3-201ENST00000607600 188 ntBASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 AC092266.1-201ENST00000610958 165 ntBASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 AC245014.3-201ENST00000618589 347 ntBASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 AC015967.1-201ENST00000619893 476 ntBASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 AL451142.2-201ENST00000429076 2090 ntBASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHGA11Q9Y5H2 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 SELENOWP1-201ENST00000322792 252 ntBASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 Y_RNA.151-201ENST00000363566 112 ntBASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 RNA5SP232-201ENST00000364144 119 ntBASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 Y_RNA.577-201ENST00000384794 101 ntBASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 MIR135A2-201ENST00000384854 100 ntBASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 AC016739.1-201ENST00000405359 345 ntBASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 MIR1302-6-201ENST00000408466 90 ntBASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 HMGB1P27-201ENST00000431429 603 ntBASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 PNKDP1-201ENST00000435914 430 ntBASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 AC073910.1-201ENST00000445047 438 ntBASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 EEF1B2P3-201ENST00000447718 678 ntBASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 EIF4A1P11-201ENST00000451239 222 ntBASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 AC104634.1-201ENST00000452720 462 ntBASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 AC133473.1-201ENST00000455173 299 ntBASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 RNU7-187P-201ENST00000458985 68 ntBASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 AL133445.1-201ENST00000467051 452 ntBASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 RN7SL269P-201ENST00000467795 305 ntBASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 HSD3BP3-201ENST00000514706 994 ntBASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 SNORA40.14-201ENST00000516543 86 ntBASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 Y_RNA.715-201ENST00000517082 110 ntBASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 AC060780.2-201ENST00000589047 198 ntBASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 AL139099.4-201ENST00000614802 114 ntBASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 SDR42E1P2-201ENST00000614861 481 ntBASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 AL450472.3-201ENST00000615578 367 ntBASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 FAM91A3P-201ENST00000456826 2544 ntBASIC5.68□□□□□ -1.5
PCDHGA11Q9Y5H2 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms