Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 AC091133.4-201ENST00000511142 308 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 AC006499.2-201ENST00000513470 337 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 RN7SKP298-201ENST00000515950 94 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 AP000790.1-201ENST00000528891 737 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 AP001781.1-201ENST00000530977 207 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 RPS3AP4-201ENST00000555161 764 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 AC009101.1-201ENST00000568135 242 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 MTCO3P24-201ENST00000572729 782 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 MIR548S-201ENST00000581352 82 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 AC115085.1-201ENST00000588924 229 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 AC091488.1-201ENST00000604239 660 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 AC069234.5-201ENST00000611056 416 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 U4.5-201ENST00000617137 123 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 AL157786.1-207ENST00000627771 695 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 CDRT1-208ENST00000630868 794 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 OR5AK4P-201ENST00000635912 903 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 CRYM-AS1-204ENST00000637983 556 ntBASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGB1Q9Y5G3 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 AL122126.1-201ENST00000546905 1318 ntBASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 RNU6-777P-201ENST00000364265 104 ntBASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 RNU6-1042P-201ENST00000384204 107 ntBASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 MIR506-201ENST00000384998 124 ntBASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 RPL17P50-201ENST00000396131 546 ntBASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 AC109780.2-201ENST00000413467 845 ntBASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 AL139095.3-201ENST00000419672 1203 ntBASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 UQCRBP1-201ENST00000421129 336 ntBASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 AL031663.1-201ENST00000437445 219 ntBASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 AC244505.5-201ENST00000443639 207 ntBASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 NDUFA5P7-201ENST00000452914 242 ntBASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 AC098824.1-201ENST00000453565 980 ntBASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 DHFRP3-201ENST00000455595 559 ntBASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 AL121769.1-201ENST00000469473 401 ntBASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 AC087385.1-201ENST00000475062 312 ntBASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 AL358832.1-201ENST00000497800 389 ntBASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 AC108941.1-201ENST00000502853 530 ntBASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 AC105252.1-201ENST00000503089 286 ntBASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 FTH1P9-201ENST00000513251 355 ntBASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 AP002453.2-201ENST00000533503 320 ntBASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 AC106785.1-201ENST00000565935 262 ntBASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 MIR5697-201ENST00000578045 78 ntBASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 AL034351.1-201ENST00000605288 668 ntBASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 ARF4P1-201ENST00000605447 541 ntBASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 AC091834.1-201ENST00000614543 472 ntBASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 uc_338.13-201ENST00000618243 179 ntBASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 U7.8-201ENST00000619968 63 ntBASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 AL356321.1-201ENST00000621360 228 ntBASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
PCDHGB1Q9Y5G3 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.77□□□□□ -1.81
PCDHGB1Q9Y5G3 AC016716.1-201ENST00000265882 708 ntBASIC3.77□□□□□ -1.81
PCDHGB1Q9Y5G3 RNU6-462P-201ENST00000362659 105 ntBASIC3.77□□□□□ -1.81
PCDHGB1Q9Y5G3 RNU5F-7P-201ENST00000363696 115 ntBASIC3.77□□□□□ -1.81
PCDHGB1Q9Y5G3 Y_RNA.256-201ENST00000364594 104 ntBASIC3.77□□□□□ -1.81
PCDHGB1Q9Y5G3 RNU5E-5P-201ENST00000365379 116 ntBASIC3.77□□□□□ -1.81
PCDHGB1Q9Y5G3 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
PCDHGB1Q9Y5G3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHGB1Q9Y5G3 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms