Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 RNA5SP468-201ENST00000516782 93 ntBASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 IGHV3-76-201ENST00000522465 295 ntBASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 AP003102.1-201ENST00000525638 661 ntBASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 AL035411.2-201ENST00000604022 421 ntBASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 AC112220.2-201ENST00000605513 533 ntBASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 AC009237.15-201ENST00000610252 501 ntBASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 AL592295.2-201ENST00000612578 206 ntBASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 AL590240.3-201ENST00000621416 943 ntBASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 AC018816.2-201ENST00000621460 353 ntBASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 AC110801.1-201ENST00000623590 212 ntBASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 AC095031.1-201ENST00000623685 672 ntBASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 AP003485.1-201ENST00000625093 753 ntBASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 AF117829.1-206ENST00000621883 3802 ntBASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 ZNF833P-201ENST00000424938 1494 ntBASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 AL365361.1-201ENST00000566942 3481 ntBASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 Z83843.1-201ENST00000604070 3685 ntBASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 Y_RNA.25-201ENST00000362528 102 ntBASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 RNU6-1257P-201ENST00000384625 110 ntBASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 MIR184-201ENST00000384962 84 ntBASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 AL355143.1-201ENST00000407101 841 ntBASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 LUZP4P1-201ENST00000415420 344 ntBASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 AC017079.2-201ENST00000416102 485 ntBASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 AC012065.2-201ENST00000421295 375 ntBASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 GLRXP1-201ENST00000423261 334 ntBASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 AL512649.1-201ENST00000428997 581 ntBASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 TXNP1-201ENST00000441872 371 ntBASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 MTND2P19-201ENST00000449129 1012 ntBASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 AC079203.1-201ENST00000487972 404 ntBASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 AC096751.1-202ENST00000502691 1067 ntBASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 PHBP14-201ENST00000512887 367 ntBASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 RNU6-1261P-201ENST00000517194 104 ntBASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 MTND2P7-201ENST00000521337 640 ntBASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 MIR5680-201ENST00000577577 84 ntBASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 SNORD84-203ENST00000584275 78 ntBASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 YPEL5P2-201ENST00000605553 359 ntBASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 MIR8057-201ENST00000620957 69 ntBASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 U6.101-201ENST00000637707 76 ntBASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 MKKS-204ENST00000639674 192 ntBASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.09□□□□□ -1.91
NPIPA1Q9UND3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
NPIPA1Q9UND3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.09□□□□□ -1.92
NPIPA1Q9UND3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.08□□□□□ -1.92
NPIPA1Q9UND3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
NPIPA1Q9UND3 AP005901.5-201ENST00000545779 1796 ntBASIC3.08□□□□□ -1.92
NPIPA1Q9UND3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.08□□□□□ -1.92
NPIPA1Q9UND3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.08□□□□□ -1.92
NPIPA1Q9UND3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NPIPA1Q9UND3 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
NPIPA1Q9UND3 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NPIPA1Q9UND3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
NPIPA1Q9UND3 RSL24D1P1-201ENST00000404972 493 ntBASIC3.08□□□□□ -1.92
NPIPA1Q9UND3 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.08□□□□□ -1.92
NPIPA1Q9UND3 RNU6-55P-201ENST00000411092 107 ntBASIC3.08□□□□□ -1.92
NPIPA1Q9UND3 RNU6-954P-201ENST00000411355 107 ntBASIC3.08□□□□□ -1.92
NPIPA1Q9UND3 AC126124.2-201ENST00000413542 321 ntBASIC3.08□□□□□ -1.92
NPIPA1Q9UND3 YPEL5P1-201ENST00000419731 367 ntBASIC3.08□□□□□ -1.92
NPIPA1Q9UND3 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NPIPA1Q9UND3 RPL23AP82-202ENST00000427528 469 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms