Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AL360157.1-201ENST00000565962 87 ntBASIC6.26□□□□□ -1.41
SHROOM4Q9ULL8 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC6.26□□□□□ -1.41
SHROOM4Q9ULL8 AP001269.3-201ENST00000588718 329 ntBASIC6.26□□□□□ -1.41
SHROOM4Q9ULL8 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC6.26□□□□□ -1.41
SHROOM4Q9ULL8 ATP5A1P2-202ENST00000616464 443 ntBASIC6.26□□□□□ -1.41
SHROOM4Q9ULL8 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
SHROOM4Q9ULL8 KPNA2P2-201ENST00000419546 1489 ntBASIC6.25□□□□□ -1.41
SHROOM4Q9ULL8 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC6.25□□□□□ -1.41
SHROOM4Q9ULL8 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHROOM4Q9ULL8 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC6.25□□□□□ -1.41
SHROOM4Q9ULL8 ANAPC10P1-201ENST00000395991 556 ntBASIC6.25□□□□□ -1.41
SHROOM4Q9ULL8 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC6.25□□□□□ -1.41
SHROOM4Q9ULL8 AC244098.2-201ENST00000422068 99 ntBASIC6.25□□□□□ -1.41
SHROOM4Q9ULL8 AL035410.1-201ENST00000427409 427 ntBASIC6.25□□□□□ -1.41
SHROOM4Q9ULL8 RPS20P32-201ENST00000456044 356 ntBASIC6.25□□□□□ -1.41
SHROOM4Q9ULL8 SYPL1P1-201ENST00000473622 768 ntBASIC6.25□□□□□ -1.41
SHROOM4Q9ULL8 MTCO3P44-201ENST00000510977 541 ntBASIC6.25□□□□□ -1.41
SHROOM4Q9ULL8 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC6.25□□□□□ -1.41
SHROOM4Q9ULL8 RN7SKP31-201ENST00000516354 278 ntBASIC6.25□□□□□ -1.41
SHROOM4Q9ULL8 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC6.25□□□□□ -1.41
SHROOM4Q9ULL8 AC090695.1-201ENST00000561269 1222 ntBASIC6.25□□□□□ -1.41
SHROOM4Q9ULL8 AADACP1-206ENST00000561502 1193 ntBASIC6.25□□□□□ -1.41
SHROOM4Q9ULL8 AL157394.1-201ENST00000562983 1224 ntBASIC6.25□□□□□ -1.41
SHROOM4Q9ULL8 AP001521.1-201ENST00000609150 300 ntBASIC6.25□□□□□ -1.41
SHROOM4Q9ULL8 AC073968.1-201ENST00000618594 637 ntBASIC6.25□□□□□ -1.41
SHROOM4Q9ULL8 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHROOM4Q9ULL8 AL359693.1-201ENST00000614959 2407 ntBASIC6.24□□□□□ -1.41
SHROOM4Q9ULL8 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC6.24□□□□□ -1.41
SHROOM4Q9ULL8 RNA5SP322-201ENST00000363617 119 ntBASIC6.24□□□□□ -1.41
SHROOM4Q9ULL8 RNA5SP167-201ENST00000365461 116 ntBASIC6.24□□□□□ -1.41
SHROOM4Q9ULL8 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHROOM4Q9ULL8 RNU6-730P-201ENST00000383954 104 ntBASIC6.24□□□□□ -1.41
SHROOM4Q9ULL8 RNU1-89P-201ENST00000384592 164 ntBASIC6.24□□□□□ -1.41
SHROOM4Q9ULL8 RNA5SP229-201ENST00000410809 99 ntBASIC6.24□□□□□ -1.41
SHROOM4Q9ULL8 AC006989.1-201ENST00000427212 131 ntBASIC6.24□□□□□ -1.41
SHROOM4Q9ULL8 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC6.24□□□□□ -1.41
SHROOM4Q9ULL8 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC6.24□□□□□ -1.41
SHROOM4Q9ULL8 PABPC1P3-201ENST00000469174 459 ntBASIC6.24□□□□□ -1.41
SHROOM4Q9ULL8 AC008837.2-201ENST00000513076 418 ntBASIC6.24□□□□□ -1.41
SHROOM4Q9ULL8 HMGB1P19-201ENST00000517578 577 ntBASIC6.24□□□□□ -1.41
SHROOM4Q9ULL8 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC6.24□□□□□ -1.41
SHROOM4Q9ULL8 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC6.24□□□□□ -1.41
SHROOM4Q9ULL8 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC6.24□□□□□ -1.41
SHROOM4Q9ULL8 AC009974.1-201ENST00000608881 455 ntBASIC6.24□□□□□ -1.41
SHROOM4Q9ULL8 AL450472.3-201ENST00000615578 367 ntBASIC6.24□□□□□ -1.41
SHROOM4Q9ULL8 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC6.24□□□□□ -1.41
SHROOM4Q9ULL8 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHROOM4Q9ULL8 C2orf27A-204ENST00000623058 969 ntBASIC6.24□□□□□ -1.41
SHROOM4Q9ULL8 CYP3A51P-201ENST00000633513 256 ntBASIC6.24□□□□□ -1.41
SHROOM4Q9ULL8 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHROOM4Q9ULL8 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC6.24□□□□□ -1.41
SHROOM4Q9ULL8 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHROOM4Q9ULL8 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC6.23□□□□□ -1.41
SHROOM4Q9ULL8 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHROOM4Q9ULL8 SLC9B1P2-201ENST00000398120 1184 ntBASIC6.23□□□□□ -1.41
SHROOM4Q9ULL8 AL024474.1-201ENST00000404655 591 ntBASIC6.23□□□□□ -1.41
SHROOM4Q9ULL8 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC6.23□□□□□ -1.41
SHROOM4Q9ULL8 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC6.23□□□□□ -1.41
SHROOM4Q9ULL8 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC6.23□□□□□ -1.41
SHROOM4Q9ULL8 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC6.23□□□□□ -1.41
SHROOM4Q9ULL8 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
SHROOM4Q9ULL8 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC6.23□□□□□ -1.41
SHROOM4Q9ULL8 AP001636.2-201ENST00000525517 696 ntBASIC6.23□□□□□ -1.41
SHROOM4Q9ULL8 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC6.23□□□□□ -1.41
SHROOM4Q9ULL8 AP003385.6-201ENST00000531603 374 ntBASIC6.23□□□□□ -1.41
SHROOM4Q9ULL8 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC6.23□□□□□ -1.41
SHROOM4Q9ULL8 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC6.23□□□□□ -1.41
SHROOM4Q9ULL8 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC6.23□□□□□ -1.41
SHROOM4Q9ULL8 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
SHROOM4Q9ULL8 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SHROOM4Q9ULL8 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SHROOM4Q9ULL8 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SHROOM4Q9ULL8 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 RNU6-636P-201ENST00000384598 107 ntBASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 RNU6-837P-201ENST00000391056 108 ntBASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 AL590084.1-201ENST00000407885 387 ntBASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 AC006548.1-201ENST00000427470 102 ntBASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 OR4G11P-201ENST00000492842 939 ntBASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 AC108078.3-201ENST00000502633 489 ntBASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 APOOP4-201ENST00000513530 597 ntBASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 RDM1-219ENST00000615378 542 ntTSL 3 BASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 CR381572.1-201ENST00000625098 102 ntBASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 SLC10A5P1-201ENST00000379063 1306 ntBASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 OSBPL9P4-201ENST00000371707 1800 ntBASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 RNU5D-1-201ENST00000363299 116 ntBASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 Y_RNA.465-201ENST00000384293 102 ntBASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 AC012065.2-201ENST00000421295 375 ntBASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 AC084290.1-201ENST00000434995 374 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms