Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 RNU6-1231P-201ENST00000517185 103 ntBASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 AL121603.1-201ENST00000553815 142 ntBASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 TGIF1P1-201ENST00000558095 802 ntBASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 AC136618.2-201ENST00000575091 400 ntBASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 AC090615.1-201ENST00000577519 154 ntBASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 AC004853.1-201ENST00000604902 698 ntBASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 AC090186.1-201ENST00000605991 572 ntBASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 AC048344.4-201ENST00000619744 527 ntBASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 AL356596.1-201ENST00000624230 379 ntBASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 AC007671.2-201ENST00000637344 619 ntBASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.96□□□□□ -1.78
LIMA1Q9UHB6 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 RNU6-433P-201ENST00000363216 104 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 RNA5SP283-201ENST00000365604 119 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 AL049693.1-201ENST00000402760 611 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 RPS7P15-201ENST00000415804 584 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 AC245054.1-201ENST00000420944 258 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 AC234781.2-201ENST00000426370 994 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 UBE2FP3-201ENST00000436366 524 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 H2AFZP6-201ENST00000444403 394 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 HSFY6P-201ENST00000445573 403 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 MTCO1P27-201ENST00000448269 226 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 PAXBP1P1-201ENST00000449315 447 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 AC010655.1-201ENST00000449336 292 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 AL133217.1-201ENST00000450980 425 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 AL353691.1-201ENST00000451332 387 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 AC007967.1-201ENST00000455422 1159 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 ST13P14-201ENST00000474095 734 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 AC068305.1-201ENST00000497406 726 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 HMGB1P22-201ENST00000505315 124 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 AC010460.1-201ENST00000507087 466 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 AC093809.1-201ENST00000509155 340 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 RNU6-678P-201ENST00000516832 109 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 SNORA31.20-201ENST00000517111 133 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 IGKV2D-23-201ENST00000518179 286 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 AC026333.2-201ENST00000542164 106 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 MIR378J-201ENST00000611988 109 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 AC005344.1-201ENST00000613391 459 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 Z99129.2-201ENST00000619967 314 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 AL357559.1-201ENST00000622228 274 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 AL354798.1-201ENST00000622505 329 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 AP000676.3-201ENST00000623299 569 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 AC009039.2-201ENST00000624524 529 ntBASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
LIMA1Q9UHB6 PRO1804-201ENST00000623780 2050 ntBASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 AP001486.2-201ENST00000561652 5113 ntBASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 Y_RNA.169-201ENST00000363745 96 ntBASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 RNU5A-2P-201ENST00000384337 116 ntBASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 RN7SKP285-201ENST00000410137 318 ntBASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 RAD23BP2-201ENST00000416003 1207 ntBASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 MTCO3P12-201ENST00000416718 547 ntBASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 MTND4P20-201ENST00000424125 869 ntBASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 MTND1P20-201ENST00000430341 950 ntBASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 RPL21P112-201ENST00000434403 463 ntBASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 Z82190.1-201ENST00000454534 490 ntBASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 SNRPGP5-201ENST00000456003 220 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms