Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RIMBP3Q9UFD9 MIR365B-201ENST00000362317 111 ntBASIC3.5□□□□□ -1.85
RIMBP3Q9UFD9 SNORA41-201ENST00000384675 132 ntBASIC3.5□□□□□ -1.85
RIMBP3Q9UFD9 RPS15AP28-201ENST00000435088 386 ntBASIC3.5□□□□□ -1.85
RIMBP3Q9UFD9 AC080013.2-201ENST00000460866 323 ntBASIC3.5□□□□□ -1.85
RIMBP3Q9UFD9 AC107015.1-201ENST00000466902 747 ntBASIC3.5□□□□□ -1.85
RIMBP3Q9UFD9 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.5□□□□□ -1.85
RIMBP3Q9UFD9 OR4A45P-201ENST00000529954 901 ntBASIC3.5□□□□□ -1.85
RIMBP3Q9UFD9 HMGB3P26-201ENST00000560051 582 ntBASIC3.5□□□□□ -1.85
RIMBP3Q9UFD9 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.5□□□□□ -1.85
RIMBP3Q9UFD9 MIR4303-201ENST00000581299 66 ntBASIC3.5□□□□□ -1.85
RIMBP3Q9UFD9 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC3.5□□□□□ -1.85
RIMBP3Q9UFD9 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RIMBP3Q9UFD9 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RIMBP3Q9UFD9 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
RIMBP3Q9UFD9 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RIMBP3Q9UFD9 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
RIMBP3Q9UFD9 RPL9P7-201ENST00000330965 580 ntBASIC3.49□□□□□ -1.85
RIMBP3Q9UFD9 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.49□□□□□ -1.85
RIMBP3Q9UFD9 AL356806.1-201ENST00000422524 916 ntBASIC3.49□□□□□ -1.85
RIMBP3Q9UFD9 RPL23AP74-201ENST00000437246 471 ntBASIC3.49□□□□□ -1.85
RIMBP3Q9UFD9 UBE2V1P5-201ENST00000440070 405 ntBASIC3.49□□□□□ -1.85
RIMBP3Q9UFD9 RN7SL297P-201ENST00000483161 293 ntBASIC3.49□□□□□ -1.85
RIMBP3Q9UFD9 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.49□□□□□ -1.85
RIMBP3Q9UFD9 AC135279.1-201ENST00000543493 504 ntBASIC3.49□□□□□ -1.85
RIMBP3Q9UFD9 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.49□□□□□ -1.85
RIMBP3Q9UFD9 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.49□□□□□ -1.85
RIMBP3Q9UFD9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC3.49□□□□□ -1.85
RIMBP3Q9UFD9 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
RIMBP3Q9UFD9 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
RIMBP3Q9UFD9 Y_RNA.295-201ENST00000364918 102 ntBASIC3.48□□□□□ -1.85
RIMBP3Q9UFD9 AL159169.1-201ENST00000421119 127 ntBASIC3.48□□□□□ -1.85
RIMBP3Q9UFD9 MTCO2P17-201ENST00000424336 677 ntBASIC3.48□□□□□ -1.85
RIMBP3Q9UFD9 FO393414.1-201ENST00000428697 1184 ntBASIC3.48□□□□□ -1.85
RIMBP3Q9UFD9 RPS6P12-201ENST00000432491 726 ntBASIC3.48□□□□□ -1.85
RIMBP3Q9UFD9 RPS7P5-201ENST00000441482 581 ntBASIC3.48□□□□□ -1.85
RIMBP3Q9UFD9 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RIMBP3Q9UFD9 XKRY-201ENST00000510392 1100 ntBASIC3.48□□□□□ -1.85
RIMBP3Q9UFD9 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.48□□□□□ -1.85
RIMBP3Q9UFD9 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.48□□□□□ -1.85
RIMBP3Q9UFD9 AP000857.1-201ENST00000532151 543 ntBASIC3.48□□□□□ -1.85
RIMBP3Q9UFD9 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.48□□□□□ -1.85
RIMBP3Q9UFD9 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.48□□□□□ -1.85
RIMBP3Q9UFD9 AC010872.1-201ENST00000624225 675 ntBASIC3.48□□□□□ -1.85
RIMBP3Q9UFD9 AC095038.3-201ENST00000634439 195 ntBASIC3.48□□□□□ -1.85
RIMBP3Q9UFD9 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
RIMBP3Q9UFD9 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.48□□□□□ -1.85
RIMBP3Q9UFD9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RIMBP3Q9UFD9 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC3.48□□□□□ -1.85
RIMBP3Q9UFD9 AC017007.3-201ENST00000479865 435 ntBASIC3.48□□□□□ -1.85
RIMBP3Q9UFD9 OR52A4P-203ENST00000498233 1014 ntBASIC3.48□□□□□ -1.85
RIMBP3Q9UFD9 AC021146.5-201ENST00000503544 545 ntBASIC3.48□□□□□ -1.85
RIMBP3Q9UFD9 MLLT10P2-201ENST00000506434 249 ntBASIC3.48□□□□□ -1.85
RIMBP3Q9UFD9 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.48□□□□□ -1.85
RIMBP3Q9UFD9 AL356280.1-201ENST00000603614 379 ntBASIC3.48□□□□□ -1.85
RIMBP3Q9UFD9 RNU1-57P-201ENST00000384491 166 ntBASIC3.47□□□□□ -1.85
RIMBP3Q9UFD9 SNORA40.18-201ENST00000391200 128 ntBASIC3.47□□□□□ -1.85
RIMBP3Q9UFD9 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.47□□□□□ -1.85
RIMBP3Q9UFD9 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.47□□□□□ -1.85
RIMBP3Q9UFD9 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.47□□□□□ -1.85
RIMBP3Q9UFD9 AC093311.1-201ENST00000506586 2021 ntBASIC3.47□□□□□ -1.85
RIMBP3Q9UFD9 RNA5SP200-201ENST00000516360 103 ntBASIC3.47□□□□□ -1.85
RIMBP3Q9UFD9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.47□□□□□ -1.85
RIMBP3Q9UFD9 RPS3AP4-201ENST00000555161 764 ntBASIC3.47□□□□□ -1.85
RIMBP3Q9UFD9 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.47□□□□□ -1.85
RIMBP3Q9UFD9 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.47□□□□□ -1.85
RIMBP3Q9UFD9 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.47□□□□□ -1.85
RIMBP3Q9UFD9 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.46□□□□□ -1.86
RIMBP3Q9UFD9 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.46□□□□□ -1.86
RIMBP3Q9UFD9 EIF2S2P4-201ENST00000461070 984 ntBASIC3.46□□□□□ -1.86
RIMBP3Q9UFD9 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
RIMBP3Q9UFD9 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.46□□□□□ -1.86
RIMBP3Q9UFD9 OR5D17P-201ENST00000531492 978 ntBASIC3.46□□□□□ -1.86
RIMBP3Q9UFD9 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.46□□□□□ -1.86
RIMBP3Q9UFD9 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.46□□□□□ -1.86
RIMBP3Q9UFD9 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.46□□□□□ -1.86
RIMBP3Q9UFD9 MIR3683-201ENST00000580847 82 ntBASIC3.46□□□□□ -1.86
RIMBP3Q9UFD9 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
RIMBP3Q9UFD9 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
RIMBP3Q9UFD9 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.45□□□□□ -1.86
RIMBP3Q9UFD9 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RIMBP3Q9UFD9 AL021407.1-201ENST00000404531 386 ntBASIC3.45□□□□□ -1.86
RIMBP3Q9UFD9 RPS20P25-201ENST00000412447 352 ntBASIC3.45□□□□□ -1.86
RIMBP3Q9UFD9 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.45□□□□□ -1.86
RIMBP3Q9UFD9 AC098826.1-201ENST00000433943 471 ntBASIC3.45□□□□□ -1.86
RIMBP3Q9UFD9 ATP5J2P3-201ENST00000451550 258 ntBASIC3.45□□□□□ -1.86
RIMBP3Q9UFD9 AC107398.1-201ENST00000486904 505 ntBASIC3.45□□□□□ -1.86
RIMBP3Q9UFD9 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.45□□□□□ -1.86
RIMBP3Q9UFD9 LTV1P1-201ENST00000510683 1237 ntBASIC3.45□□□□□ -1.86
RIMBP3Q9UFD9 snoZ278.1-201ENST00000517059 112 ntBASIC3.45□□□□□ -1.86
RIMBP3Q9UFD9 MTCYBP19-201ENST00000517463 1124 ntBASIC3.45□□□□□ -1.86
RIMBP3Q9UFD9 HMGB1P1-201ENST00000522557 636 ntBASIC3.45□□□□□ -1.86
RIMBP3Q9UFD9 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.45□□□□□ -1.86
RIMBP3Q9UFD9 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.45□□□□□ -1.86
RIMBP3Q9UFD9 PVT1_3.1-201ENST00000620853 95 ntBASIC3.45□□□□□ -1.86
RIMBP3Q9UFD9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
RIMBP3Q9UFD9 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
RIMBP3Q9UFD9 RLIMP2-201ENST00000427891 1563 ntBASIC3.45□□□□□ -1.86
RIMBP3Q9UFD9 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
RIMBP3Q9UFD9 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 156.4 ms