Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC004908.2-201ENST00000609090 574 ntBASIC4.09□□□□□ -1.75
LRFN1Q9P244 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.09□□□□□ -1.75
LRFN1Q9P244 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.09□□□□□ -1.75
LRFN1Q9P244 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.09□□□□□ -1.75
LRFN1Q9P244 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LRFN1Q9P244 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
LRFN1Q9P244 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
LRFN1Q9P244 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.76
LRFN1Q9P244 AC139769.1-204ENST00000472297 1931 ntBASIC4.09□□□□□ -1.76
LRFN1Q9P244 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.09□□□□□ -1.76
LRFN1Q9P244 MAPK10-303ENST00000641324 3959 ntBASIC4.08□□□□□ -1.76
LRFN1Q9P244 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LRFN1Q9P244 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
LRFN1Q9P244 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
LRFN1Q9P244 AC097374.1-203ENST00000400783 485 ntBASIC4.08□□□□□ -1.76
LRFN1Q9P244 RNU2-71P-201ENST00000411395 189 ntBASIC4.08□□□□□ -1.76
LRFN1Q9P244 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.08□□□□□ -1.76
LRFN1Q9P244 RPL7AP73-201ENST00000413490 353 ntBASIC4.08□□□□□ -1.76
LRFN1Q9P244 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.08□□□□□ -1.76
LRFN1Q9P244 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.08□□□□□ -1.76
LRFN1Q9P244 MTATP6P4-201ENST00000427725 675 ntBASIC4.08□□□□□ -1.76
LRFN1Q9P244 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.08□□□□□ -1.76
LRFN1Q9P244 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.08□□□□□ -1.76
LRFN1Q9P244 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.08□□□□□ -1.76
LRFN1Q9P244 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LRFN1Q9P244 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.08□□□□□ -1.76
LRFN1Q9P244 DHFRP3-201ENST00000455595 559 ntBASIC4.08□□□□□ -1.76
LRFN1Q9P244 VN1R17P-201ENST00000472048 1090 ntBASIC4.08□□□□□ -1.76
LRFN1Q9P244 RPS3AP50-201ENST00000487064 803 ntBASIC4.08□□□□□ -1.76
LRFN1Q9P244 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.08□□□□□ -1.76
LRFN1Q9P244 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.08□□□□□ -1.76
LRFN1Q9P244 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.08□□□□□ -1.76
LRFN1Q9P244 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.08□□□□□ -1.76
LRFN1Q9P244 AC022447.1-201ENST00000515358 464 ntBASIC4.08□□□□□ -1.76
LRFN1Q9P244 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LRFN1Q9P244 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.08□□□□□ -1.76
LRFN1Q9P244 AC123904.2-201ENST00000548059 300 ntBASIC4.08□□□□□ -1.76
LRFN1Q9P244 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.08□□□□□ -1.76
LRFN1Q9P244 AC007424.1-203ENST00000554613 687 ntBASIC4.08□□□□□ -1.76
LRFN1Q9P244 AC005951.1-201ENST00000576706 485 ntBASIC4.08□□□□□ -1.76
LRFN1Q9P244 COX6CP3-201ENST00000580869 223 ntBASIC4.08□□□□□ -1.76
LRFN1Q9P244 MIR3138-201ENST00000585238 82 ntBASIC4.08□□□□□ -1.76
LRFN1Q9P244 AC009977.1-201ENST00000586015 570 ntBASIC4.08□□□□□ -1.76
LRFN1Q9P244 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.08□□□□□ -1.76
LRFN1Q9P244 AC022146.1-201ENST00000595307 847 ntBASIC4.08□□□□□ -1.76
LRFN1Q9P244 VN1R85P-201ENST00000601587 426 ntBASIC4.08□□□□□ -1.76
LRFN1Q9P244 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.08□□□□□ -1.76
LRFN1Q9P244 AC113403.1-201ENST00000604910 193 ntBASIC4.08□□□□□ -1.76
LRFN1Q9P244 AC006023.2-201ENST00000609916 167 ntBASIC4.08□□□□□ -1.76
LRFN1Q9P244 AC023043.4-201ENST00000612081 449 ntBASIC4.08□□□□□ -1.76
LRFN1Q9P244 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
LRFN1Q9P244 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.08□□□□□ -1.76
LRFN1Q9P244 AC093838.1-201ENST00000613014 469 ntBASIC4.08□□□□□ -1.76
LRFN1Q9P244 uc_338.13-201ENST00000618243 179 ntBASIC4.08□□□□□ -1.76
LRFN1Q9P244 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
LRFN1Q9P244 AC009509.4-201ENST00000619202 509 ntBASIC4.08□□□□□ -1.76
LRFN1Q9P244 AC243312.2-201ENST00000623340 601 ntBASIC4.08□□□□□ -1.76
LRFN1Q9P244 AC112204.3-201ENST00000623822 332 ntBASIC4.08□□□□□ -1.76
LRFN1Q9P244 AL159972.1-201ENST00000625150 448 ntBASIC4.08□□□□□ -1.76
LRFN1Q9P244 MIR4275-201ENST00000636486 87 ntBASIC4.08□□□□□ -1.76
LRFN1Q9P244 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.08□□□□□ -1.76
LRFN1Q9P244 AC010149.2-201ENST00000637608 315 ntBASIC4.08□□□□□ -1.76
LRFN1Q9P244 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
LRFN1Q9P244 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LRFN1Q9P244 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LRFN1Q9P244 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LRFN1Q9P244 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.07□□□□□ -1.76
LRFN1Q9P244 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.07□□□□□ -1.76
LRFN1Q9P244 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
LRFN1Q9P244 MTND4P26-201ENST00000415971 1359 ntBASIC4.07□□□□□ -1.76
LRFN1Q9P244 RNU5E-8P-201ENST00000363502 116 ntBASIC4.07□□□□□ -1.76
LRFN1Q9P244 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
LRFN1Q9P244 MIR23B-201ENST00000384832 97 ntBASIC4.07□□□□□ -1.76
LRFN1Q9P244 MIR3065-201ENST00000390137 79 ntBASIC4.07□□□□□ -1.76
LRFN1Q9P244 RNU4-65P-201ENST00000410473 140 ntBASIC4.07□□□□□ -1.76
LRFN1Q9P244 HMGN1P24-201ENST00000412282 298 ntBASIC4.07□□□□□ -1.76
LRFN1Q9P244 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.07□□□□□ -1.76
LRFN1Q9P244 MTCO2P34-201ENST00000421994 607 ntBASIC4.07□□□□□ -1.76
LRFN1Q9P244 PPP1R11P2-201ENST00000423543 382 ntBASIC4.07□□□□□ -1.76
LRFN1Q9P244 RPL23AP38-201ENST00000423801 469 ntBASIC4.07□□□□□ -1.76
LRFN1Q9P244 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.07□□□□□ -1.76
LRFN1Q9P244 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.07□□□□□ -1.76
LRFN1Q9P244 RPL23AP25-201ENST00000430973 463 ntBASIC4.07□□□□□ -1.76
LRFN1Q9P244 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.07□□□□□ -1.76
LRFN1Q9P244 MTCO3P5-201ENST00000433620 714 ntBASIC4.07□□□□□ -1.76
LRFN1Q9P244 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.07□□□□□ -1.76
LRFN1Q9P244 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.07□□□□□ -1.76
LRFN1Q9P244 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.07□□□□□ -1.76
LRFN1Q9P244 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.07□□□□□ -1.76
LRFN1Q9P244 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.07□□□□□ -1.76
LRFN1Q9P244 NUTF2P3-201ENST00000448540 384 ntBASIC4.07□□□□□ -1.76
LRFN1Q9P244 PDSS1P2-201ENST00000449397 678 ntBASIC4.07□□□□□ -1.76
LRFN1Q9P244 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.07□□□□□ -1.76
LRFN1Q9P244 RPL7P15-201ENST00000461190 712 ntBASIC4.07□□□□□ -1.76
LRFN1Q9P244 AC108751.2-201ENST00000469993 231 ntBASIC4.07□□□□□ -1.76
LRFN1Q9P244 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.07□□□□□ -1.76
LRFN1Q9P244 TMED11P-201ENST00000479478 690 ntBASIC4.07□□□□□ -1.76
LRFN1Q9P244 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.07□□□□□ -1.76
LRFN1Q9P244 AC135721.1-201ENST00000497954 479 ntBASIC4.07□□□□□ -1.76
LRFN1Q9P244 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms