Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.04□□□□□ -1.76
BLOC1S4Q9NUP1 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
BLOC1S4Q9NUP1 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.04□□□□□ -1.76
BLOC1S4Q9NUP1 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
BLOC1S4Q9NUP1 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
BLOC1S4Q9NUP1 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
BLOC1S4Q9NUP1 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.04□□□□□ -1.76
BLOC1S4Q9NUP1 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 SNORD9-201ENST00000362566 104 ntBASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 Y_RNA.234-201ENST00000364409 97 ntBASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 RNU2-43P-201ENST00000410306 190 ntBASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 ATP5A1P2-201ENST00000412323 255 ntBASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 MTCO2P21-201ENST00000419780 677 ntBASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 RPL27AP8-201ENST00000424277 446 ntBASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 AC079780.1-201ENST00000428259 207 ntBASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 MTCYBP45-201ENST00000435243 565 ntBASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 RPL21P133-201ENST00000443666 476 ntBASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 AL359073.1-201ENST00000448036 403 ntBASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 MTCO3P16-201ENST00000454456 754 ntBASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 VN1R104P-201ENST00000505115 1009 ntBASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 AC022483.1-201ENST00000514020 567 ntBASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 RN7SKP265-201ENST00000516448 223 ntBASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 SNORA70.18-201ENST00000516696 98 ntBASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 RNU6-579P-201ENST00000516879 102 ntBASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 RANP9-201ENST00000519957 271 ntBASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 AC006130.2-201ENST00000586202 326 ntBASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 AC022022.2-201ENST00000602989 360 ntBASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 AC039056.2-201ENST00000622261 511 ntBASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 MTCO1P9-201ENST00000505577 1534 ntBASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 AL136164.4-201ENST00000625013 2135 ntBASIC4.03□□□□□ -1.76
BLOC1S4Q9NUP1 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 AL590704.1-201ENST00000402856 794 ntBASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 SYF2P2-201ENST00000417620 583 ntBASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 RPL36AP36-201ENST00000418616 301 ntBASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 DBIP2-201ENST00000419076 262 ntBASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 AL035423.1-201ENST00000420331 213 ntBASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 AC002075.2-201ENST00000425207 252 ntBASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 MTND1P32-201ENST00000433043 938 ntBASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 SETP5-201ENST00000437270 562 ntBASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 AC010655.1-201ENST00000449336 292 ntBASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 MTND1P9-201ENST00000453775 944 ntBASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 RPS23P3-201ENST00000470993 430 ntBASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 ACTR3P3-201ENST00000480448 893 ntBASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 RPS3AP50-201ENST00000487064 803 ntBASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 AC002456.2-201ENST00000509356 380 ntBASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 IGKV2D-23-201ENST00000518179 286 ntBASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 AC234772.3-201ENST00000602277 528 ntBASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 BDH2P1-201ENST00000602288 736 ntBASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 AC006077.1-201ENST00000604746 343 ntBASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 AC090186.1-201ENST00000605991 572 ntBASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 AC092354.2-201ENST00000607786 514 ntBASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms