Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 SNORA7.2-201ENST00000364446 145 ntBASIC4.39□□□□□ -1.71
VPS45Q9NRW7 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS45Q9NRW7 SNORA75-201ENST00000384158 137 ntBASIC4.39□□□□□ -1.71
VPS45Q9NRW7 AC097374.1-203ENST00000400783 485 ntBASIC4.39□□□□□ -1.71
VPS45Q9NRW7 RNA5SP39-201ENST00000411245 120 ntBASIC4.39□□□□□ -1.71
VPS45Q9NRW7 AF274854.1-201ENST00000413236 615 ntBASIC4.39□□□□□ -1.71
VPS45Q9NRW7 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS45Q9NRW7 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS45Q9NRW7 MTND1P28-201ENST00000435623 950 ntBASIC4.39□□□□□ -1.71
VPS45Q9NRW7 AL512326.1-201ENST00000443050 721 ntBASIC4.39□□□□□ -1.71
VPS45Q9NRW7 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
VPS45Q9NRW7 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS45Q9NRW7 AL162151.2-201ENST00000448875 158 ntBASIC4.39□□□□□ -1.71
VPS45Q9NRW7 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS45Q9NRW7 RPL35AP15-201ENST00000468042 339 ntBASIC4.39□□□□□ -1.71
VPS45Q9NRW7 AP000797.1-201ENST00000478870 387 ntBASIC4.39□□□□□ -1.71
VPS45Q9NRW7 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS45Q9NRW7 FAM172BP-201ENST00000487497 1089 ntBASIC4.39□□□□□ -1.71
VPS45Q9NRW7 RPS27AP13-201ENST00000498403 237 ntBASIC4.39□□□□□ -1.71
VPS45Q9NRW7 TMEM251P1-201ENST00000503717 318 ntBASIC4.39□□□□□ -1.71
VPS45Q9NRW7 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS45Q9NRW7 AC021678.1-201ENST00000505195 936 ntBASIC4.39□□□□□ -1.71
VPS45Q9NRW7 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS45Q9NRW7 AC005921.1-201ENST00000510589 286 ntBASIC4.39□□□□□ -1.71
VPS45Q9NRW7 AC008958.1-201ENST00000511047 682 ntBASIC4.39□□□□□ -1.71
VPS45Q9NRW7 AL117351.2-201ENST00000513571 157 ntBASIC4.39□□□□□ -1.71
VPS45Q9NRW7 AC108064.1-201ENST00000513791 460 ntBASIC4.39□□□□□ -1.71
VPS45Q9NRW7 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
VPS45Q9NRW7 AC091489.2-201ENST00000566263 604 ntBASIC4.39□□□□□ -1.71
VPS45Q9NRW7 AC010928.3-201ENST00000587712 541 ntBASIC4.39□□□□□ -1.71
VPS45Q9NRW7 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS45Q9NRW7 MIR6875-201ENST00000617506 72 ntBASIC4.39□□□□□ -1.71
VPS45Q9NRW7 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS45Q9NRW7 AC244517.1-201ENST00000606030 2086 ntBASIC4.39□□□□□ -1.71
VPS45Q9NRW7 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS45Q9NRW7 AP002907.1-201ENST00000606361 1430 ntBASIC4.38□□□□□ -1.71
VPS45Q9NRW7 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VPS45Q9NRW7 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS45Q9NRW7 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VPS45Q9NRW7 AL353746.1-201ENST00000566293 6881 ntBASIC4.38□□□□□ -1.71
VPS45Q9NRW7 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS45Q9NRW7 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
VPS45Q9NRW7 RNU6-989P-201ENST00000362756 107 ntBASIC4.38□□□□□ -1.71
VPS45Q9NRW7 RNU5F-6P-201ENST00000362979 116 ntBASIC4.38□□□□□ -1.71
VPS45Q9NRW7 SNORD46.1-201ENST00000364139 104 ntBASIC4.38□□□□□ -1.71
VPS45Q9NRW7 RN7SKP177-201ENST00000410567 355 ntBASIC4.38□□□□□ -1.71
VPS45Q9NRW7 TPMTP2-201ENST00000414372 726 ntBASIC4.38□□□□□ -1.71
VPS45Q9NRW7 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.38□□□□□ -1.71
VPS45Q9NRW7 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS45Q9NRW7 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS45Q9NRW7 USP9YP14-201ENST00000430663 563 ntBASIC4.38□□□□□ -1.71
VPS45Q9NRW7 PRELID3BP10-201ENST00000431957 584 ntBASIC4.38□□□□□ -1.71
VPS45Q9NRW7 RPL23AP83-201ENST00000434984 473 ntBASIC4.38□□□□□ -1.71
VPS45Q9NRW7 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS45Q9NRW7 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.38□□□□□ -1.71
VPS45Q9NRW7 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS45Q9NRW7 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS45Q9NRW7 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS45Q9NRW7 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS45Q9NRW7 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VPS45Q9NRW7 AL592156.1-201ENST00000508758 304 ntBASIC4.38□□□□□ -1.71
VPS45Q9NRW7 POU5F1P7-201ENST00000508759 541 ntBASIC4.38□□□□□ -1.71
VPS45Q9NRW7 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS45Q9NRW7 RNU6-405P-201ENST00000516637 110 ntBASIC4.38□□□□□ -1.71
VPS45Q9NRW7 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS45Q9NRW7 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS45Q9NRW7 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.38□□□□□ -1.71
VPS45Q9NRW7 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.38□□□□□ -1.71
VPS45Q9NRW7 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS45Q9NRW7 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS45Q9NRW7 AC006270.2-201ENST00000578523 652 ntBASIC4.38□□□□□ -1.71
VPS45Q9NRW7 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.38□□□□□ -1.71
VPS45Q9NRW7 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.38□□□□□ -1.71
VPS45Q9NRW7 AC053481.4-201ENST00000583164 216 ntBASIC4.38□□□□□ -1.71
VPS45Q9NRW7 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.38□□□□□ -1.71
VPS45Q9NRW7 AP000403.1-201ENST00000603349 851 ntBASIC4.38□□□□□ -1.71
VPS45Q9NRW7 AC073648.5-201ENST00000603502 305 ntBASIC4.38□□□□□ -1.71
VPS45Q9NRW7 MIR6867-201ENST00000610636 67 ntBASIC4.38□□□□□ -1.71
VPS45Q9NRW7 AC087241.4-201ENST00000612441 480 ntBASIC4.38□□□□□ -1.71
VPS45Q9NRW7 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.38□□□□□ -1.71
VPS45Q9NRW7 AC007546.1-201ENST00000619452 559 ntBASIC4.38□□□□□ -1.71
VPS45Q9NRW7 AC018755.4-201ENST00000619715 454 ntBASIC4.38□□□□□ -1.71
VPS45Q9NRW7 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.38□□□□□ -1.71
VPS45Q9NRW7 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS45Q9NRW7 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
VPS45Q9NRW7 AL157700.1-201ENST00000561973 1432 ntBASIC4.38□□□□□ -1.71
VPS45Q9NRW7 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VPS45Q9NRW7 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS45Q9NRW7 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS45Q9NRW7 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS45Q9NRW7 AC011266.1-201ENST00000624119 3569 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
VPS45Q9NRW7 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VPS45Q9NRW7 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS45Q9NRW7 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS45Q9NRW7 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS45Q9NRW7 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
VPS45Q9NRW7 MIR208A-201ENST00000362287 71 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 RNU6-525P-201ENST00000363685 104 ntBASIC4.37□□□□□ -1.71
VPS45Q9NRW7 MIR513A2-201ENST00000385249 127 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms