Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
DDX4Q9NQI0 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
DDX4Q9NQI0 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
DDX4Q9NQI0 AC087359.1-201ENST00000508335 1740 ntBASIC4.13□□□□□ -1.75
DDX4Q9NQI0 EXOC5P1-201ENST00000510543 1969 ntBASIC4.13□□□□□ -1.75
DDX4Q9NQI0 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
DDX4Q9NQI0 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
DDX4Q9NQI0 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
DDX4Q9NQI0 AL450338.1-201ENST00000407987 512 ntBASIC4.13□□□□□ -1.75
DDX4Q9NQI0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.13□□□□□ -1.75
DDX4Q9NQI0 RPS15AP38-201ENST00000413110 372 ntBASIC4.13□□□□□ -1.75
DDX4Q9NQI0 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.13□□□□□ -1.75
DDX4Q9NQI0 OR1AA1P-201ENST00000419597 916 ntBASIC4.13□□□□□ -1.75
DDX4Q9NQI0 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.13□□□□□ -1.75
DDX4Q9NQI0 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.13□□□□□ -1.75
DDX4Q9NQI0 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
DDX4Q9NQI0 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.13□□□□□ -1.75
DDX4Q9NQI0 TMED11P-201ENST00000479478 690 ntBASIC4.13□□□□□ -1.75
DDX4Q9NQI0 RPS3AP43-201ENST00000479743 781 ntBASIC4.13□□□□□ -1.75
DDX4Q9NQI0 RPL32P34-201ENST00000486380 400 ntBASIC4.13□□□□□ -1.75
DDX4Q9NQI0 RPL21P13-201ENST00000488305 481 ntBASIC4.13□□□□□ -1.75
DDX4Q9NQI0 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.13□□□□□ -1.75
DDX4Q9NQI0 AC104685.1-201ENST00000502445 371 ntBASIC4.13□□□□□ -1.75
DDX4Q9NQI0 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.13□□□□□ -1.75
DDX4Q9NQI0 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.13□□□□□ -1.75
DDX4Q9NQI0 AC093281.2-201ENST00000510153 597 ntBASIC4.13□□□□□ -1.75
DDX4Q9NQI0 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.13□□□□□ -1.75
DDX4Q9NQI0 XKRY-201ENST00000510392 1100 ntBASIC4.13□□□□□ -1.75
DDX4Q9NQI0 OR5BM1P-201ENST00000512021 366 ntBASIC4.13□□□□□ -1.75
DDX4Q9NQI0 AC104057.1-201ENST00000515547 497 ntBASIC4.13□□□□□ -1.75
DDX4Q9NQI0 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.13□□□□□ -1.75
DDX4Q9NQI0 MYL12AP1-201ENST00000518490 515 ntBASIC4.13□□□□□ -1.75
DDX4Q9NQI0 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.13□□□□□ -1.75
DDX4Q9NQI0 AC008489.1-201ENST00000524271 483 ntBASIC4.13□□□□□ -1.75
DDX4Q9NQI0 AC087373.1-201ENST00000524920 491 ntBASIC4.13□□□□□ -1.75
DDX4Q9NQI0 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.13□□□□□ -1.75
DDX4Q9NQI0 PIGPP4-201ENST00000584447 307 ntBASIC4.13□□□□□ -1.75
DDX4Q9NQI0 SNORD39.3-201ENST00000584451 71 ntBASIC4.13□□□□□ -1.75
DDX4Q9NQI0 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.13□□□□□ -1.75
DDX4Q9NQI0 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.13□□□□□ -1.75
DDX4Q9NQI0 AP000811.1-201ENST00000603803 651 ntBASIC4.13□□□□□ -1.75
DDX4Q9NQI0 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.13□□□□□ -1.75
DDX4Q9NQI0 AL160281.1-201ENST00000605307 311 ntBASIC4.13□□□□□ -1.75
DDX4Q9NQI0 HSPE1P14-201ENST00000605812 302 ntBASIC4.13□□□□□ -1.75
DDX4Q9NQI0 AC093783.1-201ENST00000612976 329 ntBASIC4.13□□□□□ -1.75
DDX4Q9NQI0 AL607023.1-201ENST00000620045 248 ntBASIC4.13□□□□□ -1.75
DDX4Q9NQI0 AC092184.1-201ENST00000625042 715 ntBASIC4.13□□□□□ -1.75
DDX4Q9NQI0 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.13□□□□□ -1.75
DDX4Q9NQI0 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.13□□□□□ -1.75
DDX4Q9NQI0 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
DDX4Q9NQI0 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
DDX4Q9NQI0 OR5BR1P-201ENST00000524992 1330 ntBASIC4.13□□□□□ -1.75
DDX4Q9NQI0 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
DDX4Q9NQI0 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
DDX4Q9NQI0 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
DDX4Q9NQI0 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.12□□□□□ -1.75
DDX4Q9NQI0 AL079343.1-201ENST00000572358 1771 ntBASIC4.12□□□□□ -1.75
DDX4Q9NQI0 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
DDX4Q9NQI0 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
DDX4Q9NQI0 AC032011.1-201ENST00000611703 1549 ntBASIC4.12□□□□□ -1.75
DDX4Q9NQI0 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
DDX4Q9NQI0 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
DDX4Q9NQI0 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
DDX4Q9NQI0 SNRPEP3-201ENST00000338402 276 ntBASIC4.12□□□□□ -1.75
DDX4Q9NQI0 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
DDX4Q9NQI0 Y_RNA.18-201ENST00000362461 102 ntBASIC4.12□□□□□ -1.75
DDX4Q9NQI0 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.12□□□□□ -1.75
DDX4Q9NQI0 SNORA70E-201ENST00000384492 135 ntBASIC4.12□□□□□ -1.75
DDX4Q9NQI0 SNORA48.2-201ENST00000390926 124 ntBASIC4.12□□□□□ -1.75
DDX4Q9NQI0 SKINT1L-201ENST00000401057 817 ntBASIC4.12□□□□□ -1.75
DDX4Q9NQI0 RNU2-21P-201ENST00000410368 188 ntBASIC4.12□□□□□ -1.75
DDX4Q9NQI0 USP9YP33-201ENST00000412220 421 ntBASIC4.12□□□□□ -1.75
DDX4Q9NQI0 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.12□□□□□ -1.75
DDX4Q9NQI0 AC009237.5-201ENST00000414271 501 ntBASIC4.12□□□□□ -1.75
DDX4Q9NQI0 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.12□□□□□ -1.75
DDX4Q9NQI0 RAC1P3-201ENST00000416129 580 ntBASIC4.12□□□□□ -1.75
DDX4Q9NQI0 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.12□□□□□ -1.75
DDX4Q9NQI0 USP9YP35-201ENST00000435696 412 ntBASIC4.12□□□□□ -1.75
DDX4Q9NQI0 AL445567.1-201ENST00000439121 144 ntBASIC4.12□□□□□ -1.75
DDX4Q9NQI0 AC092427.1-201ENST00000439177 601 ntBASIC4.12□□□□□ -1.75
DDX4Q9NQI0 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.12□□□□□ -1.75
DDX4Q9NQI0 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.12□□□□□ -1.75
DDX4Q9NQI0 RPL23AP35-201ENST00000451906 501 ntBASIC4.12□□□□□ -1.75
DDX4Q9NQI0 RN7SL807P-201ENST00000470923 297 ntBASIC4.12□□□□□ -1.75
DDX4Q9NQI0 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.12□□□□□ -1.75
DDX4Q9NQI0 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.12□□□□□ -1.75
DDX4Q9NQI0 AC025445.1-201ENST00000502728 300 ntBASIC4.12□□□□□ -1.75
DDX4Q9NQI0 AC090071.1-201ENST00000507713 644 ntBASIC4.12□□□□□ -1.75
DDX4Q9NQI0 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.12□□□□□ -1.75
DDX4Q9NQI0 RNU6-583P-201ENST00000516012 92 ntBASIC4.12□□□□□ -1.75
DDX4Q9NQI0 RNA5SP216-201ENST00000516111 123 ntBASIC4.12□□□□□ -1.75
DDX4Q9NQI0 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.12□□□□□ -1.75
DDX4Q9NQI0 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.12□□□□□ -1.75
DDX4Q9NQI0 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.12□□□□□ -1.75
DDX4Q9NQI0 AGGF1P8-201ENST00000562979 1000 ntBASIC4.12□□□□□ -1.75
DDX4Q9NQI0 MIR4644-201ENST00000579929 84 ntBASIC4.12□□□□□ -1.75
DDX4Q9NQI0 VN1R90P-201ENST00000595717 726 ntBASIC4.12□□□□□ -1.75
DDX4Q9NQI0 MIR8057-201ENST00000620957 69 ntBASIC4.12□□□□□ -1.75
DDX4Q9NQI0 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.12□□□□□ -1.75
DDX4Q9NQI0 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 245.3 ms