Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AL590240.3-201ENST00000621416 943 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 AL355480.1-201ENST00000629041 99 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 PRO1804-201ENST00000623780 2050 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 AC012321.1-201ENST00000561622 1588 ntBASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
CHMP1AQ9HD42 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 NCAPGP1-201ENST00000505112 1814 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 MT-TH-201ENST00000387441 69 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 HSPE1P26-201ENST00000405341 275 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 RNU2-37P-201ENST00000410695 177 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 AL359704.1-201ENST00000411586 781 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 NPM1P11-201ENST00000417106 855 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 AL389915.1-201ENST00000422463 466 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 OR8F1P-201ENST00000425243 930 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 AL157831.1-201ENST00000426134 473 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 TRIM60P18-201ENST00000441518 828 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 MTND2P22-201ENST00000444325 1033 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 RAC1P7-201ENST00000445367 377 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 RPS17P13-201ENST00000448974 407 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 RPL36AP13-201ENST00000457490 317 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 RN7SL98P-201ENST00000462271 300 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 VN1R17P-201ENST00000472048 1090 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 RN7SL826P-201ENST00000479724 288 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 RPL23AP72-201ENST00000492447 435 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 RN7SL810P-201ENST00000493031 276 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 RPL29P14-201ENST00000495837 428 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 RNA5SP519-201ENST00000516480 119 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 RN7SKP92-201ENST00000517266 244 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 SNRPGP16-201ENST00000533275 226 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 AF131215.7-201ENST00000602443 707 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 AL158211.4-201ENST00000606988 584 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 AL031775.1-201ENST00000607014 887 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 AL049539.1-201ENST00000611964 459 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 AC100827.5-201ENST00000615883 426 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 AL445363.3-201ENST00000623080 671 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 AC079597.1-201ENST00000624306 508 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 AP005264.7-201ENST00000625003 745 ntBASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHMP1AQ9HD42 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 AP002001.2-201ENST00000529025 1469 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 RNU1-14P-201ENST00000362759 152 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 RNU4-21P-201ENST00000362802 126 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 SNORD35B-201ENST00000363660 87 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 SNORA37-201ENST00000384504 129 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 U3.20-201ENST00000390909 217 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 SNORA26.8-201ENST00000391306 124 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 AL049693.1-201ENST00000402760 611 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 MTCYBP36-201ENST00000404146 440 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 RNU2-43P-201ENST00000410306 190 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 RN7SKP235-201ENST00000410662 305 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 MED14P1-201ENST00000430517 648 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 TXNP1-201ENST00000441872 371 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 MTND2P4-201ENST00000445034 1004 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 BMI1P1-201ENST00000445879 941 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 Z83846.1-201ENST00000446798 265 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 AC239367.2-201ENST00000447309 705 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 MTCO1P42-201ENST00000457379 726 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 RN7SL610P-201ENST00000463845 291 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 RPL31P61-201ENST00000496160 376 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms