Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 BX664608.1-201ENST00000610519 487 ntBASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 SNORA51.2-201ENST00000364595 132 ntBASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 MIR1261-201ENST00000408659 82 ntBASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 RN7SKP140-201ENST00000411196 284 ntBASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 NPM1P11-201ENST00000417106 855 ntBASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 DPH3P2-201ENST00000422618 250 ntBASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 AL392003.1-201ENST00000434394 243 ntBASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 MTCO3P17-201ENST00000443775 513 ntBASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 Z77249.1-201ENST00000444622 1175 ntBASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 OR4G11P-201ENST00000492842 939 ntBASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 AP000916.1-201ENST00000533869 835 ntBASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 AC008083.2-201ENST00000546707 476 ntBASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 AC010735.1-201ENST00000567305 1026 ntBASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 MIR4769-201ENST00000584126 77 ntBASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 AC136601.2-201ENST00000604356 474 ntBASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 AL392112.1-201ENST00000605115 829 ntBASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 AL137847.3-201ENST00000611521 109 ntBASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 AC139769.3-201ENST00000618383 175 ntBASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 AC009501.3-201ENST00000605001 1352 ntBASIC2.16□□□□□ -2.06
KIAA1549Q9HCM3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
KIAA1549Q9HCM3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
KIAA1549Q9HCM3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
KIAA1549Q9HCM3 RNU1-101P-201ENST00000391171 127 ntBASIC2.15□□□□□ -2.07
KIAA1549Q9HCM3 AC105402.1-201ENST00000413336 545 ntBASIC2.15□□□□□ -2.07
KIAA1549Q9HCM3 RPL7P10-201ENST00000417407 739 ntBASIC2.15□□□□□ -2.07
KIAA1549Q9HCM3 DPPA2P1-201ENST00000428060 556 ntBASIC2.15□□□□□ -2.07
KIAA1549Q9HCM3 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.15□□□□□ -2.07
KIAA1549Q9HCM3 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.15□□□□□ -2.07
KIAA1549Q9HCM3 AC010095.1-201ENST00000443543 144 ntBASIC2.15□□□□□ -2.07
KIAA1549Q9HCM3 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC2.15□□□□□ -2.07
KIAA1549Q9HCM3 LINC00888-204ENST00000487386 421 ntBASIC2.15□□□□□ -2.07
KIAA1549Q9HCM3 AP000867.2-201ENST00000532468 320 ntBASIC2.15□□□□□ -2.07
KIAA1549Q9HCM3 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.15□□□□□ -2.07
KIAA1549Q9HCM3 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC2.15□□□□□ -2.07
KIAA1549Q9HCM3 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.15□□□□□ -2.07
KIAA1549Q9HCM3 AC123904.3-201ENST00000547218 814 ntBASIC2.15□□□□□ -2.07
KIAA1549Q9HCM3 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.15□□□□□ -2.07
KIAA1549Q9HCM3 AL391834.1-201ENST00000609609 560 ntBASIC2.15□□□□□ -2.07
KIAA1549Q9HCM3 AL590410.1-201ENST00000617925 333 ntBASIC2.15□□□□□ -2.07
KIAA1549Q9HCM3 AL359757.2-201ENST00000624309 274 ntBASIC2.15□□□□□ -2.07
KIAA1549Q9HCM3 AC092608.2-201ENST00000624427 218 ntBASIC2.15□□□□□ -2.07
KIAA1549Q9HCM3 FAM157B-203ENST00000639350 358 ntBASIC2.15□□□□□ -2.07
KIAA1549Q9HCM3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
KIAA1549Q9HCM3 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.15□□□□□ -2.07
KIAA1549Q9HCM3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
KIAA1549Q9HCM3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.15□□□□□ -2.07
KIAA1549Q9HCM3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.15□□□□□ -2.07
KIAA1549Q9HCM3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 HMGB1P10-201ENST00000395823 563 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 HMGB1P45-201ENST00000435986 653 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 AC093392.2-201ENST00000450682 337 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 AL513343.1-201ENST00000451818 792 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 HMGB1P26-201ENST00000452520 628 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 AC104629.2-201ENST00000468627 598 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 AC006445.2-201ENST00000510061 472 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 MTCO2P32-201ENST00000514865 403 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 AF279873.1-201ENST00000523393 313 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 AP001646.1-201ENST00000527936 915 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 AC023043.3-201ENST00000593113 385 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 AC010615.3-201ENST00000597319 394 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 AP003117.1-201ENST00000602771 554 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 AL645944.1-201ENST00000603857 493 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 AC046143.2-201ENST00000609789 160 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 AL162233.1-201ENST00000620014 944 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 NSRP1P1-201ENST00000444067 1693 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 RNU4-31P-201ENST00000384211 141 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 ATF1P1-201ENST00000406040 927 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 RNA5SP181-201ENST00000410246 98 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 RNU4-53P-201ENST00000410828 140 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 EI24P1-201ENST00000416584 867 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 AC244098.2-201ENST00000422068 99 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 AC018634.1-201ENST00000437554 401 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 RPL21P2-201ENST00000440049 481 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 FAM103A2P-201ENST00000444122 354 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 FTH1P25-201ENST00000447665 469 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms