Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 RNU7-125P-201ENST00000458760 62 ntBASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 snoU13.8-201ENST00000458890 104 ntBASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 AC023424.2-201ENST00000493479 777 ntBASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 RPL31P61-201ENST00000496160 376 ntBASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 AC005921.1-201ENST00000510589 286 ntBASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 AC118465.1-201ENST00000513820 1271 ntBASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 OR5AP1P-201ENST00000529730 940 ntBASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 RFPL1S-203ENST00000539579 330 ntBASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 AC018630.1-201ENST00000541376 925 ntBASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 AL121603.1-201ENST00000553815 142 ntBASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 AC090888.1-201ENST00000561335 1141 ntBASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 AC109446.2-201ENST00000567872 497 ntBASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 SRGNP1-201ENST00000603392 451 ntBASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 AL391261.4-201ENST00000616012 481 ntBASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 AL356585.4-201ENST00000623078 1229 ntBASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 AL356596.1-201ENST00000624230 379 ntBASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 AC009039.2-201ENST00000624524 529 ntBASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 AC127502.3-201ENST00000636170 1206 ntBASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 AP001486.2-201ENST00000561652 5113 ntBASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
POLR1BQ9H9Y6 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 RNU6-433P-201ENST00000363216 104 ntBASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 Y_RNA.169-201ENST00000363745 96 ntBASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 RNU6-343P-201ENST00000364709 104 ntBASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 RNU6-359P-201ENST00000365466 108 ntBASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 MIR483-201ENST00000385070 76 ntBASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 MIR1305-201ENST00000408300 86 ntBASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 AC127526.1-201ENST00000417526 366 ntBASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 MTND4LP10-201ENST00000435146 291 ntBASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 RPS3AP12-201ENST00000443616 753 ntBASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 AL353691.1-201ENST00000451332 387 ntBASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 RAD23BP3-201ENST00000454157 1152 ntBASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 ARPC3P2-201ENST00000457786 533 ntBASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 RPL9P32-201ENST00000464118 620 ntBASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 AC106872.3-201ENST00000495104 446 ntBASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 BTF3L4P4-201ENST00000506381 449 ntBASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 AC005178.1-201ENST00000508392 440 ntBASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 POU5F1P7-201ENST00000508759 541 ntBASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 MTND5P4-201ENST00000514978 288 ntBASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 AC026403.1-201ENST00000518938 295 ntBASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 CCNG2P1-201ENST00000549521 1000 ntBASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 AC063950.1-201ENST00000552036 308 ntBASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 AC004853.1-201ENST00000604902 698 ntBASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 AC007179.3-201ENST00000604976 235 ntBASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 AC018755.4-201ENST00000619715 454 ntBASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 MAPK10-373ENST00000641983 6772 ntBASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 AC116096.1-201ENST00000566804 2314 ntBASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.88□□□□□ -1.79
POLR1BQ9H9Y6 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms