Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.51□□□□□ -2.01
VCX3BQ9H321 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.51□□□□□ -2.01
VCX3BQ9H321 BNIP3P7-201ENST00000605641 516 ntBASIC2.51□□□□□ -2.01
VCX3BQ9H321 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
VCX3BQ9H321 AL021707.7-201ENST00000607991 416 ntBASIC2.51□□□□□ -2.01
VCX3BQ9H321 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC2.51□□□□□ -2.01
VCX3BQ9H321 AL161629.2-201ENST00000615347 275 ntBASIC2.51□□□□□ -2.01
VCX3BQ9H321 AL391597.1-201ENST00000618707 694 ntBASIC2.51□□□□□ -2.01
VCX3BQ9H321 MIR7641-1-201ENST00000627518 61 ntBASIC2.51□□□□□ -2.01
VCX3BQ9H321 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.51□□□□□ -2.01
VCX3BQ9H321 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
VCX3BQ9H321 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.51□□□□□ -2.01
VCX3BQ9H321 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
VCX3BQ9H321 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
VCX3BQ9H321 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.5□□□□□ -2.01
VCX3BQ9H321 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
VCX3BQ9H321 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.5□□□□□ -2.01
VCX3BQ9H321 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.5□□□□□ -2.01
VCX3BQ9H321 AL596028.1-201ENST00000326971 197 ntBASIC2.5□□□□□ -2.01
VCX3BQ9H321 SNORA71.1-201ENST00000364523 117 ntBASIC2.5□□□□□ -2.01
VCX3BQ9H321 RNA5SP354-201ENST00000391247 136 ntBASIC2.5□□□□□ -2.01
VCX3BQ9H321 RNU6-564P-201ENST00000410983 104 ntBASIC2.5□□□□□ -2.01
VCX3BQ9H321 RPL26P29-201ENST00000415623 438 ntBASIC2.5□□□□□ -2.01
VCX3BQ9H321 SYF2P2-201ENST00000417620 583 ntBASIC2.5□□□□□ -2.01
VCX3BQ9H321 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.5□□□□□ -2.01
VCX3BQ9H321 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.5□□□□□ -2.01
VCX3BQ9H321 RPS20P5-201ENST00000434808 360 ntBASIC2.5□□□□□ -2.01
VCX3BQ9H321 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.5□□□□□ -2.01
VCX3BQ9H321 AC006028.1-201ENST00000438379 402 ntBASIC2.5□□□□□ -2.01
VCX3BQ9H321 AC104389.3-201ENST00000445629 235 ntBASIC2.5□□□□□ -2.01
VCX3BQ9H321 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.5□□□□□ -2.01
VCX3BQ9H321 RNU7-26P-201ENST00000458980 63 ntBASIC2.5□□□□□ -2.01
VCX3BQ9H321 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC2.5□□□□□ -2.01
VCX3BQ9H321 AC231760.1-201ENST00000498002 260 ntBASIC2.5□□□□□ -2.01
VCX3BQ9H321 AC006445.2-201ENST00000510061 472 ntBASIC2.5□□□□□ -2.01
VCX3BQ9H321 AC100870.1-201ENST00000522035 505 ntBASIC2.5□□□□□ -2.01
VCX3BQ9H321 NDUFS5P6-201ENST00000529136 295 ntBASIC2.5□□□□□ -2.01
VCX3BQ9H321 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.5□□□□□ -2.01
VCX3BQ9H321 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC2.5□□□□□ -2.01
VCX3BQ9H321 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.5□□□□□ -2.01
VCX3BQ9H321 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.5□□□□□ -2.01
VCX3BQ9H321 CRYM-AS1-204ENST00000637983 556 ntBASIC2.5□□□□□ -2.01
VCX3BQ9H321 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC2.5□□□□□ -2.01
VCX3BQ9H321 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.5□□□□□ -2.01
VCX3BQ9H321 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
VCX3BQ9H321 AL161912.2-201ENST00000565707 3007 ntBASIC2.49□□□□□ -2.01
VCX3BQ9H321 RNU1-33P-201ENST00000364249 162 ntBASIC2.49□□□□□ -2.01
VCX3BQ9H321 RNU6-98P-201ENST00000384173 107 ntBASIC2.49□□□□□ -2.01
VCX3BQ9H321 RNU6-339P-201ENST00000384310 107 ntBASIC2.49□□□□□ -2.01
VCX3BQ9H321 AL513475.1-201ENST00000406602 315 ntBASIC2.49□□□□□ -2.01
VCX3BQ9H321 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC2.49□□□□□ -2.01
VCX3BQ9H321 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC2.49□□□□□ -2.01
VCX3BQ9H321 AL031659.1-201ENST00000447075 539 ntBASIC2.49□□□□□ -2.01
VCX3BQ9H321 AC233279.1-201ENST00000455300 423 ntBASIC2.49□□□□□ -2.01
VCX3BQ9H321 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC2.49□□□□□ -2.01
VCX3BQ9H321 AC107398.1-201ENST00000486904 505 ntBASIC2.49□□□□□ -2.01
VCX3BQ9H321 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.49□□□□□ -2.01
VCX3BQ9H321 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.49□□□□□ -2.01
VCX3BQ9H321 AC126177.3-201ENST00000551839 688 ntBASIC2.49□□□□□ -2.01
VCX3BQ9H321 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.49□□□□□ -2.01
VCX3BQ9H321 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.49□□□□□ -2.01
VCX3BQ9H321 MIR3609-201ENST00000582661 80 ntBASIC2.49□□□□□ -2.01
VCX3BQ9H321 AC079089.3-201ENST00000603094 673 ntBASIC2.49□□□□□ -2.01
VCX3BQ9H321 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.49□□□□□ -2.01
VCX3BQ9H321 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC2.49□□□□□ -2.01
VCX3BQ9H321 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.49□□□□□ -2.01
VCX3BQ9H321 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
VCX3BQ9H321 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
VCX3BQ9H321 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.49□□□□□ -2.01
VCX3BQ9H321 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
VCX3BQ9H321 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VCX3BQ9H321 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
VCX3BQ9H321 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC2.48□□□□□ -2.01
VCX3BQ9H321 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.48□□□□□ -2.01
VCX3BQ9H321 IPO7P1-201ENST00000442031 636 ntBASIC2.48□□□□□ -2.01
VCX3BQ9H321 AC078857.1-201ENST00000469870 667 ntBASIC2.48□□□□□ -2.01
VCX3BQ9H321 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.48□□□□□ -2.01
VCX3BQ9H321 RPS27P26-201ENST00000494583 239 ntBASIC2.48□□□□□ -2.01
VCX3BQ9H321 FABP5P6-201ENST00000510588 409 ntBASIC2.48□□□□□ -2.01
VCX3BQ9H321 RNU6-491P-201ENST00000516099 110 ntBASIC2.48□□□□□ -2.01
VCX3BQ9H321 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.48□□□□□ -2.01
VCX3BQ9H321 AP000889.2-201ENST00000532684 490 ntBASIC2.48□□□□□ -2.01
VCX3BQ9H321 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.48□□□□□ -2.01
VCX3BQ9H321 RPS3AP23-202ENST00000574601 686 ntBASIC2.48□□□□□ -2.01
VCX3BQ9H321 MIR3117-201ENST00000584034 78 ntBASIC2.48□□□□□ -2.01
VCX3BQ9H321 AL355812.1-201ENST00000603215 216 ntBASIC2.48□□□□□ -2.01
VCX3BQ9H321 HMGB1P24-202ENST00000615653 685 ntBASIC2.48□□□□□ -2.01
VCX3BQ9H321 AC025588.4-201ENST00000615802 908 ntBASIC2.48□□□□□ -2.01
VCX3BQ9H321 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC2.48□□□□□ -2.01
VCX3BQ9H321 BX649567.1-201ENST00000642071 1134 ntBASIC2.48□□□□□ -2.01
VCX3BQ9H321 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VCX3BQ9H321 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
VCX3BQ9H321 AC009812.4-201ENST00000569134 1805 ntBASIC2.47□□□□□ -2.01
VCX3BQ9H321 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.47□□□□□ -2.01
VCX3BQ9H321 HMGB1P5-201ENST00000255320 642 ntBASIC2.47□□□□□ -2.01
VCX3BQ9H321 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
VCX3BQ9H321 RNU4-23P-201ENST00000362839 140 ntBASIC2.47□□□□□ -2.01
VCX3BQ9H321 MIR421-201ENST00000365696 85 ntBASIC2.47□□□□□ -2.01
VCX3BQ9H321 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.47□□□□□ -2.01
VCX3BQ9H321 SNORA54-201ENST00000384281 123 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms