Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
DDX47Q9H0S4 CDR1-202ENST00000625883 1485 ntBASIC3.41□□□□□ -1.86
DDX47Q9H0S4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.41□□□□□ -1.86
DDX47Q9H0S4 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
DDX47Q9H0S4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.41□□□□□ -1.86
DDX47Q9H0S4 RNU4-35P-201ENST00000362588 141 ntBASIC3.41□□□□□ -1.86
DDX47Q9H0S4 RNA5SP295-201ENST00000362655 121 ntBASIC3.41□□□□□ -1.86
DDX47Q9H0S4 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
DDX47Q9H0S4 MIR122-201ENST00000385044 85 ntBASIC3.41□□□□□ -1.86
DDX47Q9H0S4 RPL21P17-201ENST00000397467 475 ntBASIC3.41□□□□□ -1.86
DDX47Q9H0S4 RPL32P35-201ENST00000415214 394 ntBASIC3.41□□□□□ -1.86
DDX47Q9H0S4 AC245052.5-201ENST00000416320 649 ntBASIC3.41□□□□□ -1.86
DDX47Q9H0S4 RPL7P30-201ENST00000420888 709 ntBASIC3.41□□□□□ -1.86
DDX47Q9H0S4 NEK4P1-201ENST00000433383 879 ntBASIC3.41□□□□□ -1.86
DDX47Q9H0S4 RPL23AP74-201ENST00000437246 471 ntBASIC3.41□□□□□ -1.86
DDX47Q9H0S4 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.41□□□□□ -1.86
DDX47Q9H0S4 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.41□□□□□ -1.86
DDX47Q9H0S4 AC009969.1-201ENST00000438726 172 ntBASIC3.41□□□□□ -1.86
DDX47Q9H0S4 NOTCH2P1-201ENST00000443481 624 ntBASIC3.41□□□□□ -1.86
DDX47Q9H0S4 AC093278.1-201ENST00000494700 600 ntBASIC3.41□□□□□ -1.86
DDX47Q9H0S4 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.41□□□□□ -1.86
DDX47Q9H0S4 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.41□□□□□ -1.86
DDX47Q9H0S4 PRELID3BP6-201ENST00000503839 571 ntBASIC3.41□□□□□ -1.86
DDX47Q9H0S4 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.41□□□□□ -1.86
DDX47Q9H0S4 KLHL2P1-201ENST00000508691 521 ntBASIC3.41□□□□□ -1.86
DDX47Q9H0S4 FCF1P8-201ENST00000510322 597 ntBASIC3.41□□□□□ -1.86
DDX47Q9H0S4 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.41□□□□□ -1.86
DDX47Q9H0S4 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.41□□□□□ -1.86
DDX47Q9H0S4 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
DDX47Q9H0S4 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.41□□□□□ -1.86
DDX47Q9H0S4 AC103843.2-201ENST00000530523 682 ntBASIC3.41□□□□□ -1.86
DDX47Q9H0S4 SNRPGP16-201ENST00000533275 226 ntBASIC3.41□□□□□ -1.86
DDX47Q9H0S4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.41□□□□□ -1.86
DDX47Q9H0S4 AC097504.2-201ENST00000608088 454 ntBASIC3.41□□□□□ -1.86
DDX47Q9H0S4 MIR7851-201ENST00000610611 160 ntBASIC3.41□□□□□ -1.86
DDX47Q9H0S4 PLCE1P1-201ENST00000622094 305 ntBASIC3.41□□□□□ -1.86
DDX47Q9H0S4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
DDX47Q9H0S4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
DDX47Q9H0S4 AF117829.1-206ENST00000621883 3802 ntBASIC3.41□□□□□ -1.86
DDX47Q9H0S4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
DDX47Q9H0S4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.4□□□□□ -1.86
DDX47Q9H0S4 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
DDX47Q9H0S4 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
DDX47Q9H0S4 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
DDX47Q9H0S4 AC005183.1-201ENST00000603687 1979 ntBASIC3.4□□□□□ -1.86
DDX47Q9H0S4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
DDX47Q9H0S4 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
DDX47Q9H0S4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
DDX47Q9H0S4 SNORD116-12-201ENST00000384468 92 ntBASIC3.4□□□□□ -1.87
DDX47Q9H0S4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
DDX47Q9H0S4 RN7SKP111-201ENST00000410349 271 ntBASIC3.4□□□□□ -1.87
DDX47Q9H0S4 AC012498.1-201ENST00000424037 437 ntBASIC3.4□□□□□ -1.87
DDX47Q9H0S4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.4□□□□□ -1.87
DDX47Q9H0S4 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.4□□□□□ -1.87
DDX47Q9H0S4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.4□□□□□ -1.87
DDX47Q9H0S4 Z95327.1-201ENST00000446082 482 ntBASIC3.4□□□□□ -1.87
DDX47Q9H0S4 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.4□□□□□ -1.87
DDX47Q9H0S4 TRGVB-201ENST00000453257 471 ntBASIC3.4□□□□□ -1.87
DDX47Q9H0S4 Z82190.1-201ENST00000454534 490 ntBASIC3.4□□□□□ -1.87
DDX47Q9H0S4 RPL7P15-201ENST00000461190 712 ntBASIC3.4□□□□□ -1.87
DDX47Q9H0S4 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.4□□□□□ -1.87
DDX47Q9H0S4 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
DDX47Q9H0S4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.4□□□□□ -1.87
DDX47Q9H0S4 AC104619.4-201ENST00000510773 249 ntBASIC3.4□□□□□ -1.87
DDX47Q9H0S4 AC105914.1-201ENST00000511798 226 ntBASIC3.4□□□□□ -1.87
DDX47Q9H0S4 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
DDX47Q9H0S4 SLC2A13P1-201ENST00000531560 322 ntBASIC3.4□□□□□ -1.87
DDX47Q9H0S4 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.4□□□□□ -1.87
DDX47Q9H0S4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.4□□□□□ -1.87
DDX47Q9H0S4 AC034105.4-201ENST00000568304 277 ntBASIC3.4□□□□□ -1.87
DDX47Q9H0S4 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.4□□□□□ -1.87
DDX47Q9H0S4 MIR4637-201ENST00000582405 84 ntBASIC3.4□□□□□ -1.87
DDX47Q9H0S4 SNORD84-203ENST00000584275 78 ntBASIC3.4□□□□□ -1.87
DDX47Q9H0S4 MAGOH2P-202ENST00000584384 429 ntBASIC3.4□□□□□ -1.87
DDX47Q9H0S4 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.4□□□□□ -1.87
DDX47Q9H0S4 AP001330.4-201ENST00000604350 154 ntBASIC3.4□□□□□ -1.87
DDX47Q9H0S4 AC069304.2-201ENST00000605154 435 ntBASIC3.4□□□□□ -1.87
DDX47Q9H0S4 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.4□□□□□ -1.87
DDX47Q9H0S4 AL121652.1-201ENST00000608851 448 ntBASIC3.4□□□□□ -1.87
DDX47Q9H0S4 AL110115.1-201ENST00000614396 364 ntBASIC3.4□□□□□ -1.87
DDX47Q9H0S4 AL161637.1-201ENST00000622380 412 ntBASIC3.4□□□□□ -1.87
DDX47Q9H0S4 AL356863.1-201ENST00000623378 1080 ntBASIC3.4□□□□□ -1.87
DDX47Q9H0S4 AC095031.1-201ENST00000623685 672 ntBASIC3.4□□□□□ -1.87
DDX47Q9H0S4 LINC02211-204ENST00000642024 1070 ntBASIC3.4□□□□□ -1.87
DDX47Q9H0S4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
DDX47Q9H0S4 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.4□□□□□ -1.87
DDX47Q9H0S4 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
DDX47Q9H0S4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
DDX47Q9H0S4 SGO1P2-201ENST00000429458 1589 ntBASIC3.39□□□□□ -1.87
DDX47Q9H0S4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.39□□□□□ -1.87
DDX47Q9H0S4 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
DDX47Q9H0S4 AC021755.1-201ENST00000559747 1447 ntBASIC3.39□□□□□ -1.87
DDX47Q9H0S4 AP002907.1-201ENST00000606361 1430 ntBASIC3.39□□□□□ -1.87
DDX47Q9H0S4 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
DDX47Q9H0S4 RPL21P3-201ENST00000395517 478 ntBASIC3.39□□□□□ -1.87
DDX47Q9H0S4 VN1R51P-201ENST00000411675 945 ntBASIC3.39□□□□□ -1.87
DDX47Q9H0S4 AC068533.2-201ENST00000411872 306 ntBASIC3.39□□□□□ -1.87
DDX47Q9H0S4 OR1AA1P-201ENST00000419597 916 ntBASIC3.39□□□□□ -1.87
DDX47Q9H0S4 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.39□□□□□ -1.87
DDX47Q9H0S4 EZH2P1-201ENST00000431167 291 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms