Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 AC005668.1-201ENST00000571142 476 ntBASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 AC090312.1-201ENST00000580637 348 ntBASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 AC010591.1-201ENST00000603941 649 ntBASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 FAM27D1-201ENST00000612308 341 ntBASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 AC067931.1-201ENST00000624190 671 ntBASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 AC066616.2-201ENST00000559334 1481 ntBASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 ADAM5-202ENST00000399789 1942 ntBASIC5.59□□□□□ -1.51
CNTNAP4Q9C0A0 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CNTNAP4Q9C0A0 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CNTNAP4Q9C0A0 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CNTNAP4Q9C0A0 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.52
CNTNAP4Q9C0A0 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 Y_RNA.138-201ENST00000363462 102 ntBASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 RNU6-359P-201ENST00000365466 108 ntBASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 RNU6-657P-201ENST00000383904 107 ntBASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 AL080315.1-201ENST00000406055 466 ntBASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 AL162578.1-201ENST00000406202 378 ntBASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 MTND3P8-201ENST00000412909 339 ntBASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 RPS7P15-201ENST00000415804 584 ntBASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 AC108059.2-201ENST00000434626 151 ntBASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 MRPL48P1-201ENST00000445390 636 ntBASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 AC079804.1-201ENST00000461922 436 ntBASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 AC130509.1-201ENST00000464158 433 ntBASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 VN1R105P-201ENST00000486595 910 ntBASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 RPL38P4-201ENST00000502376 214 ntBASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 AL592156.1-201ENST00000508758 304 ntBASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 PCBP2P3-201ENST00000509726 843 ntBASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 RNA5SP497-201ENST00000516081 97 ntBASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 RNU1-45P-201ENST00000517191 141 ntBASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 TVP23BP1-201ENST00000557500 617 ntBASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 AC020661.2-201ENST00000560114 134 ntBASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 MIR3167-201ENST00000579623 85 ntBASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 AC121334.2-201ENST00000605387 271 ntBASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 uc_338.9-201ENST00000617424 182 ntBASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 AL445363.3-201ENST00000623080 671 ntBASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 AC100810.6-201ENST00000638068 285 ntBASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.58□□□□□ -1.52
CNTNAP4Q9C0A0 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 AC092376.2-201ENST00000622621 4116 ntBASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 AL133243.3-201ENST00000617415 3004 ntBASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 RNU6-223P-201ENST00000362830 107 ntBASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 RNA5SP130-201ENST00000364431 114 ntBASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 MIR670-201ENST00000390142 98 ntBASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 RNU6-316P-201ENST00000391027 107 ntBASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 RNU6-1158P-201ENST00000391167 107 ntBASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 RNU6-1068P-201ENST00000410958 103 ntBASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 AC004987.3-201ENST00000413879 771 ntBASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 AL157831.1-201ENST00000426134 473 ntBASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 IFNA20P-201ENST00000436840 528 ntBASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 AL162151.2-201ENST00000448875 158 ntBASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 RPS15AP1-201ENST00000457423 391 ntBASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 AC026410.2-201ENST00000460281 156 ntBASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 RN7SL812P-201ENST00000493791 279 ntBASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 AC103851.1-201ENST00000506833 274 ntBASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 RNA5SP401-201ENST00000515920 127 ntBASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 RNU6-714P-201ENST00000516963 103 ntBASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 AC022861.1-201ENST00000522981 663 ntBASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms