Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.81□□□□□ -1.96
TRIM4Q9C037 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.81□□□□□ -1.96
TRIM4Q9C037 AC021087.2-201ENST00000504656 1203 ntBASIC2.81□□□□□ -1.96
TRIM4Q9C037 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.81□□□□□ -1.96
TRIM4Q9C037 AC111000.2-201ENST00000507775 550 ntBASIC2.81□□□□□ -1.96
TRIM4Q9C037 RNU1-61P-201ENST00000516107 151 ntBASIC2.81□□□□□ -1.96
TRIM4Q9C037 AC079600.2-201ENST00000550076 130 ntBASIC2.81□□□□□ -1.96
TRIM4Q9C037 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.81□□□□□ -1.96
TRIM4Q9C037 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.81□□□□□ -1.96
TRIM4Q9C037 AC115989.2-201ENST00000578640 563 ntBASIC2.81□□□□□ -1.96
TRIM4Q9C037 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
TRIM4Q9C037 AC007566.2-201ENST00000603642 413 ntBASIC2.81□□□□□ -1.96
TRIM4Q9C037 AC022509.4-201ENST00000621404 572 ntBASIC2.81□□□□□ -1.96
TRIM4Q9C037 AC103798.2-201ENST00000624292 632 ntBASIC2.81□□□□□ -1.96
TRIM4Q9C037 ELF2P3-201ENST00000445099 1506 ntBASIC2.81□□□□□ -1.96
TRIM4Q9C037 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
TRIM4Q9C037 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.8□□□□□ -1.96
TRIM4Q9C037 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
TRIM4Q9C037 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.8□□□□□ -1.96
TRIM4Q9C037 AL049780.3-201ENST00000624612 1583 ntBASIC2.8□□□□□ -1.96
TRIM4Q9C037 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TRIM4Q9C037 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
TRIM4Q9C037 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
TRIM4Q9C037 Y_RNA.238-201ENST00000364441 102 ntBASIC2.8□□□□□ -1.96
TRIM4Q9C037 RNU6-452P-201ENST00000384406 107 ntBASIC2.8□□□□□ -1.96
TRIM4Q9C037 ANAPC10P1-201ENST00000395991 556 ntBASIC2.8□□□□□ -1.96
TRIM4Q9C037 BTBD10P2-201ENST00000404779 676 ntBASIC2.8□□□□□ -1.96
TRIM4Q9C037 U3.42-201ENST00000408746 214 ntBASIC2.8□□□□□ -1.96
TRIM4Q9C037 RNU2-52P-201ENST00000410680 190 ntBASIC2.8□□□□□ -1.96
TRIM4Q9C037 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TRIM4Q9C037 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.8□□□□□ -1.96
TRIM4Q9C037 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.8□□□□□ -1.96
TRIM4Q9C037 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.8□□□□□ -1.96
TRIM4Q9C037 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.8□□□□□ -1.96
TRIM4Q9C037 MTCO2P32-201ENST00000514865 403 ntBASIC2.8□□□□□ -1.96
TRIM4Q9C037 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.8□□□□□ -1.96
TRIM4Q9C037 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.8□□□□□ -1.96
TRIM4Q9C037 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
TRIM4Q9C037 AC104237.2-201ENST00000612456 443 ntBASIC2.8□□□□□ -1.96
TRIM4Q9C037 U6.48-201ENST00000618523 106 ntBASIC2.8□□□□□ -1.96
TRIM4Q9C037 AP003122.6-201ENST00000623831 495 ntBASIC2.8□□□□□ -1.96
TRIM4Q9C037 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TRIM4Q9C037 AC046144.1-201ENST00000478559 1853 ntBASIC2.79□□□□□ -1.96
TRIM4Q9C037 AC138915.1-201ENST00000565427 1685 ntBASIC2.79□□□□□ -1.96
TRIM4Q9C037 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TRIM4Q9C037 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TRIM4Q9C037 MTND4P31-201ENST00000425607 1343 ntBASIC2.79□□□□□ -1.96
TRIM4Q9C037 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.79□□□□□ -1.96
TRIM4Q9C037 MIR22-201ENST00000362190 85 ntBASIC2.79□□□□□ -1.96
TRIM4Q9C037 AC109780.2-201ENST00000413467 845 ntBASIC2.79□□□□□ -1.96
TRIM4Q9C037 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.79□□□□□ -1.96
TRIM4Q9C037 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.79□□□□□ -1.96
TRIM4Q9C037 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.79□□□□□ -1.96
TRIM4Q9C037 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.79□□□□□ -1.96
TRIM4Q9C037 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC2.79□□□□□ -1.96
TRIM4Q9C037 AC008837.1-201ENST00000511513 412 ntBASIC2.79□□□□□ -1.96
TRIM4Q9C037 SCGB1D5P-201ENST00000515134 247 ntBASIC2.79□□□□□ -1.96
TRIM4Q9C037 AC117525.1-201ENST00000515228 503 ntBASIC2.79□□□□□ -1.96
TRIM4Q9C037 RN7SKP31-201ENST00000516354 278 ntBASIC2.79□□□□□ -1.96
TRIM4Q9C037 ATP5F1P5-201ENST00000526403 760 ntBASIC2.79□□□□□ -1.96
TRIM4Q9C037 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.79□□□□□ -1.96
TRIM4Q9C037 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
TRIM4Q9C037 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.79□□□□□ -1.96
TRIM4Q9C037 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.79□□□□□ -1.96
TRIM4Q9C037 CYCSP39-201ENST00000565821 309 ntBASIC2.79□□□□□ -1.96
TRIM4Q9C037 AC090312.2-201ENST00000582687 378 ntBASIC2.79□□□□□ -1.96
TRIM4Q9C037 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.79□□□□□ -1.96
TRIM4Q9C037 RPL23AP78-201ENST00000599928 470 ntBASIC2.79□□□□□ -1.96
TRIM4Q9C037 NF1P10-201ENST00000613227 742 ntBASIC2.79□□□□□ -1.96
TRIM4Q9C037 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.79□□□□□ -1.96
TRIM4Q9C037 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.79□□□□□ -1.96
TRIM4Q9C037 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.79□□□□□ -1.96
TRIM4Q9C037 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
TRIM4Q9C037 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
TRIM4Q9C037 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.78□□□□□ -1.96
TRIM4Q9C037 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.78□□□□□ -1.96
TRIM4Q9C037 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
TRIM4Q9C037 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TRIM4Q9C037 U8.2-201ENST00000363156 134 ntBASIC2.78□□□□□ -1.96
TRIM4Q9C037 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
TRIM4Q9C037 MIR181A2-201ENST00000384863 110 ntBASIC2.78□□□□□ -1.96
TRIM4Q9C037 EIF5P1-201ENST00000400019 1231 ntBASIC2.78□□□□□ -1.96
TRIM4Q9C037 AL592148.1-201ENST00000413568 445 ntBASIC2.78□□□□□ -1.96
TRIM4Q9C037 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC2.78□□□□□ -1.96
TRIM4Q9C037 DUTP6-201ENST00000425573 462 ntBASIC2.78□□□□□ -1.96
TRIM4Q9C037 RPL21P66-201ENST00000426566 466 ntBASIC2.78□□□□□ -1.96
TRIM4Q9C037 AC063976.3-201ENST00000426849 329 ntBASIC2.78□□□□□ -1.96
TRIM4Q9C037 SUMO1P4-201ENST00000429430 302 ntBASIC2.78□□□□□ -1.96
TRIM4Q9C037 LSM1P1-201ENST00000438629 273 ntBASIC2.78□□□□□ -1.96
TRIM4Q9C037 AL109741.2-201ENST00000455561 343 ntBASIC2.78□□□□□ -1.96
TRIM4Q9C037 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.78□□□□□ -1.96
TRIM4Q9C037 snoU13.7-201ENST00000459220 104 ntBASIC2.78□□□□□ -1.96
TRIM4Q9C037 AC073901.1-201ENST00000462471 408 ntBASIC2.78□□□□□ -1.96
TRIM4Q9C037 MTND3P6-201ENST00000485242 339 ntBASIC2.78□□□□□ -1.96
TRIM4Q9C037 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.78□□□□□ -1.96
TRIM4Q9C037 RPL37P25-201ENST00000507308 276 ntBASIC2.78□□□□□ -1.96
TRIM4Q9C037 RNU6-1073P-201ENST00000517182 106 ntBASIC2.78□□□□□ -1.96
TRIM4Q9C037 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.78□□□□□ -1.96
TRIM4Q9C037 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TRIM4Q9C037 AC023158.1-201ENST00000561632 1025 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms