Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC111000.2-201ENST00000507775 550 ntBASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 AC117522.3-201ENST00000507974 584 ntBASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 RNU6-488P-201ENST00000515918 99 ntBASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 RNU6-202P-201ENST00000515998 96 ntBASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 AC138761.3-201ENST00000579993 334 ntBASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 RPL23AP92-201ENST00000603609 255 ntBASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 AC004832.5-201ENST00000608677 401 ntBASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 MIR8084-201ENST00000614105 89 ntBASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.47□□□□□ -1.85
RPAP1Q9BWH6 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.46□□□□□ -1.85
RPAP1Q9BWH6 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
RPAP1Q9BWH6 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 RNU4-82P-201ENST00000362443 140 ntBASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 AC073264.1-201ENST00000411508 416 ntBASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 BMS1P22-201ENST00000414726 313 ntBASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 AC063976.3-201ENST00000426849 329 ntBASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 AL390023.1-201ENST00000428836 262 ntBASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 AL929288.2-201ENST00000446368 407 ntBASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 NIPA2P5-201ENST00000452282 464 ntBASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 DYNLL1P6-201ENST00000503440 264 ntBASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 MTND2P31-201ENST00000512602 616 ntBASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 AC007536.1-201ENST00000533382 349 ntBASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 NRBF2P5-201ENST00000603087 788 ntBASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 AC022509.4-201ENST00000621404 572 ntBASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 AL359757.2-201ENST00000624309 274 ntBASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 AC048347.1-201ENST00000624621 427 ntBASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 MIR4278-201ENST00000636094 69 ntBASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 LRRC77P-213ENST00000637727 880 ntBASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 MTND5P7-201ENST00000413558 1798 ntBASIC3.46□□□□□ -1.86
RPAP1Q9BWH6 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
RPAP1Q9BWH6 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RPAP1Q9BWH6 SNORD65C-201ENST00000390962 71 ntBASIC3.45□□□□□ -1.86
RPAP1Q9BWH6 MIR887-201ENST00000401258 79 ntBASIC3.45□□□□□ -1.86
RPAP1Q9BWH6 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.45□□□□□ -1.86
RPAP1Q9BWH6 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.45□□□□□ -1.86
RPAP1Q9BWH6 AC005517.2-201ENST00000424673 553 ntBASIC3.45□□□□□ -1.86
RPAP1Q9BWH6 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.45□□□□□ -1.86
RPAP1Q9BWH6 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.45□□□□□ -1.86
RPAP1Q9BWH6 AC087499.2-201ENST00000432861 149 ntBASIC3.45□□□□□ -1.86
RPAP1Q9BWH6 AC010881.1-201ENST00000433830 235 ntBASIC3.45□□□□□ -1.86
RPAP1Q9BWH6 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.45□□□□□ -1.86
RPAP1Q9BWH6 AL096803.2-201ENST00000450032 677 ntBASIC3.45□□□□□ -1.86
RPAP1Q9BWH6 AC108938.1-201ENST00000451204 136 ntBASIC3.45□□□□□ -1.86
RPAP1Q9BWH6 RPS26P21-201ENST00000475397 348 ntBASIC3.45□□□□□ -1.86
RPAP1Q9BWH6 SCGB1D5P-201ENST00000515134 247 ntBASIC3.45□□□□□ -1.86
RPAP1Q9BWH6 HIGD1AP6-201ENST00000521833 279 ntBASIC3.45□□□□□ -1.86
RPAP1Q9BWH6 AP001207.1-201ENST00000524051 481 ntBASIC3.45□□□□□ -1.86
RPAP1Q9BWH6 AC124293.1-201ENST00000530034 493 ntBASIC3.45□□□□□ -1.86
RPAP1Q9BWH6 AC023824.3-201ENST00000569003 562 ntBASIC3.45□□□□□ -1.86
RPAP1Q9BWH6 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.45□□□□□ -1.86
RPAP1Q9BWH6 AC010338.1-201ENST00000621823 717 ntBASIC3.45□□□□□ -1.86
RPAP1Q9BWH6 AL356094.1-201ENST00000624663 1212 ntBASIC3.45□□□□□ -1.86
RPAP1Q9BWH6 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
RPAP1Q9BWH6 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.45□□□□□ -1.86
RPAP1Q9BWH6 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 AC093010.3-201ENST00000570269 15214 ntBASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 RNU1-35P-201ENST00000362782 153 ntBASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 RNU6-609P-201ENST00000365459 107 ntBASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 MIR181A2-201ENST00000384863 110 ntBASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 RNA5SP344-201ENST00000411081 104 ntBASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 USP9YP19-201ENST00000412165 485 ntBASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 AL009174.1-201ENST00000426577 416 ntBASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 RPL21P40-201ENST00000428586 483 ntBASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 GTF2IP12-201ENST00000456547 356 ntBASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 AC087879.1-201ENST00000474343 374 ntBASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 RPS4XP6-201ENST00000477670 797 ntBASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 AC006483.1-201ENST00000487308 313 ntBASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 AC112518.2-201ENST00000508565 425 ntBASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 AC121161.1-201ENST00000510606 652 ntBASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 RNU6-416P-201ENST00000516265 103 ntBASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 AP003049.1-201ENST00000529418 457 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms