Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 CCDC58P3-201ENST00000590792 430 ntBASIC1.67□□□□□ -2.14
LIMD2Q9BT23 GLUD1P4-201ENST00000590914 418 ntBASIC1.67□□□□□ -2.14
LIMD2Q9BT23 AC015871.2-201ENST00000603605 948 ntBASIC1.67□□□□□ -2.14
LIMD2Q9BT23 AL645944.1-201ENST00000603857 493 ntBASIC1.67□□□□□ -2.14
LIMD2Q9BT23 AC124312.4-201ENST00000605533 310 ntBASIC1.67□□□□□ -2.14
LIMD2Q9BT23 MIR92B-201ENST00000607575 96 ntBASIC1.67□□□□□ -2.14
LIMD2Q9BT23 AC069200.1-201ENST00000609511 323 ntBASIC1.67□□□□□ -2.14
LIMD2Q9BT23 AC090115.4-201ENST00000609970 188 ntBASIC1.67□□□□□ -2.14
LIMD2Q9BT23 AC245517.5-201ENST00000611529 162 ntBASIC1.67□□□□□ -2.14
LIMD2Q9BT23 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC1.67□□□□□ -2.14
LIMD2Q9BT23 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC1.67□□□□□ -2.14
LIMD2Q9BT23 AC091953.5-201ENST00000622919 233 ntBASIC1.67□□□□□ -2.14
LIMD2Q9BT23 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC1.67□□□□□ -2.14
LIMD2Q9BT23 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.67□□□□□ -2.14
LIMD2Q9BT23 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC1.67□□□□□ -2.14
LIMD2Q9BT23 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
LIMD2Q9BT23 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
LIMD2Q9BT23 RNU1-35P-201ENST00000362782 153 ntBASIC1.66□□□□□ -2.14
LIMD2Q9BT23 SNORA1.3-201ENST00000384676 136 ntBASIC1.66□□□□□ -2.14
LIMD2Q9BT23 SNORA80E-201ENST00000384744 137 ntBASIC1.66□□□□□ -2.14
LIMD2Q9BT23 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LIMD2Q9BT23 U3.42-201ENST00000408746 214 ntBASIC1.66□□□□□ -2.14
LIMD2Q9BT23 AC073264.1-201ENST00000411508 416 ntBASIC1.66□□□□□ -2.14
LIMD2Q9BT23 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC1.66□□□□□ -2.14
LIMD2Q9BT23 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC1.66□□□□□ -2.14
LIMD2Q9BT23 AC092427.1-202ENST00000430569 476 ntBASIC1.66□□□□□ -2.14
LIMD2Q9BT23 OR6C71P-201ENST00000432580 913 ntBASIC1.66□□□□□ -2.14
LIMD2Q9BT23 AL671855.1-201ENST00000446875 1203 ntBASIC1.66□□□□□ -2.14
LIMD2Q9BT23 AL590664.1-201ENST00000448065 339 ntBASIC1.66□□□□□ -2.14
LIMD2Q9BT23 AP001992.1-205ENST00000462248 379 ntBASIC1.66□□□□□ -2.14
LIMD2Q9BT23 RPS4XP10-201ENST00000465034 731 ntBASIC1.66□□□□□ -2.14
LIMD2Q9BT23 AC133134.1-201ENST00000466800 359 ntBASIC1.66□□□□□ -2.14
LIMD2Q9BT23 KC877373.1-201ENST00000479066 408 ntBASIC1.66□□□□□ -2.14
LIMD2Q9BT23 RN7SL504P-201ENST00000494496 287 ntBASIC1.66□□□□□ -2.14
LIMD2Q9BT23 PCNAP1-201ENST00000505363 709 ntBASIC1.66□□□□□ -2.14
LIMD2Q9BT23 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LIMD2Q9BT23 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.66□□□□□ -2.14
LIMD2Q9BT23 SUB1P1-201ENST00000524415 382 ntBASIC1.66□□□□□ -2.14
LIMD2Q9BT23 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC1.66□□□□□ -2.14
LIMD2Q9BT23 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC1.66□□□□□ -2.14
LIMD2Q9BT23 AL049874.4-201ENST00000557593 255 ntBASIC1.66□□□□□ -2.14
LIMD2Q9BT23 AC005412.1-201ENST00000580812 1049 ntBASIC1.66□□□□□ -2.14
LIMD2Q9BT23 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.66□□□□□ -2.14
LIMD2Q9BT23 AL355812.1-201ENST00000603215 216 ntBASIC1.66□□□□□ -2.14
LIMD2Q9BT23 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LIMD2Q9BT23 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC1.66□□□□□ -2.14
LIMD2Q9BT23 AC100793.4-201ENST00000613683 429 ntBASIC1.66□□□□□ -2.14
LIMD2Q9BT23 AC007318.2-201ENST00000620999 243 ntBASIC1.66□□□□□ -2.14
LIMD2Q9BT23 AC026422.1-201ENST00000623961 452 ntBASIC1.66□□□□□ -2.14
LIMD2Q9BT23 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.66□□□□□ -2.14
LIMD2Q9BT23 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.66□□□□□ -2.14
LIMD2Q9BT23 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.66□□□□□ -2.14
LIMD2Q9BT23 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LIMD2Q9BT23 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LIMD2Q9BT23 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC1.66□□□□□ -2.14
LIMD2Q9BT23 AL359693.1-201ENST00000614959 2407 ntBASIC1.66□□□□□ -2.14
LIMD2Q9BT23 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.65□□□□□ -2.14
LIMD2Q9BT23 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.14
LIMD2Q9BT23 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.14
LIMD2Q9BT23 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
LIMD2Q9BT23 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.15
LIMD2Q9BT23 AC009501.3-201ENST00000605001 1352 ntBASIC1.65□□□□□ -2.15
LIMD2Q9BT23 RNA5SP258-201ENST00000362750 119 ntBASIC1.65□□□□□ -2.15
LIMD2Q9BT23 SNORD46.1-201ENST00000364139 104 ntBASIC1.65□□□□□ -2.15
LIMD2Q9BT23 RNVU1-3-201ENST00000364313 161 ntBASIC1.65□□□□□ -2.15
LIMD2Q9BT23 RNA5SP139-201ENST00000364340 117 ntBASIC1.65□□□□□ -2.15
LIMD2Q9BT23 MT-TC-201ENST00000387405 66 ntBASIC1.65□□□□□ -2.15
LIMD2Q9BT23 RNA5SP210-201ENST00000391034 120 ntBASIC1.65□□□□□ -2.15
LIMD2Q9BT23 RNA5SP252-201ENST00000391131 119 ntBASIC1.65□□□□□ -2.15
LIMD2Q9BT23 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
LIMD2Q9BT23 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
LIMD2Q9BT23 AC007064.1-201ENST00000412238 351 ntBASIC1.65□□□□□ -2.15
LIMD2Q9BT23 RPS3AP9-201ENST00000417027 792 ntBASIC1.65□□□□□ -2.15
LIMD2Q9BT23 USP9YP27-201ENST00000418455 438 ntBASIC1.65□□□□□ -2.15
LIMD2Q9BT23 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC1.65□□□□□ -2.15
LIMD2Q9BT23 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC1.65□□□□□ -2.15
LIMD2Q9BT23 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.65□□□□□ -2.15
LIMD2Q9BT23 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC1.65□□□□□ -2.15
LIMD2Q9BT23 SCARNA13-201ENST00000516672 275 ntBASIC1.65□□□□□ -2.15
LIMD2Q9BT23 RNA5SP471-201ENST00000516971 106 ntBASIC1.65□□□□□ -2.15
LIMD2Q9BT23 OR4V1P-201ENST00000525394 1140 ntBASIC1.65□□□□□ -2.15
LIMD2Q9BT23 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC1.65□□□□□ -2.15
LIMD2Q9BT23 AP000790.1-201ENST00000528891 737 ntBASIC1.65□□□□□ -2.15
LIMD2Q9BT23 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.65□□□□□ -2.15
LIMD2Q9BT23 CCNG2P1-201ENST00000549521 1000 ntBASIC1.65□□□□□ -2.15
LIMD2Q9BT23 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.65□□□□□ -2.15
LIMD2Q9BT23 ISCA1P3-201ENST00000577104 373 ntBASIC1.65□□□□□ -2.15
LIMD2Q9BT23 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
LIMD2Q9BT23 AC090616.3-201ENST00000582184 217 ntBASIC1.65□□□□□ -2.15
LIMD2Q9BT23 ZNF861P-201ENST00000588126 639 ntBASIC1.65□□□□□ -2.15
LIMD2Q9BT23 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC1.65□□□□□ -2.15
LIMD2Q9BT23 AL161756.2-201ENST00000604597 246 ntBASIC1.65□□□□□ -2.15
LIMD2Q9BT23 DPRXP5-201ENST00000604662 539 ntBASIC1.65□□□□□ -2.15
LIMD2Q9BT23 AC135178.6-201ENST00000605314 398 ntBASIC1.65□□□□□ -2.15
LIMD2Q9BT23 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC1.65□□□□□ -2.15
LIMD2Q9BT23 FRG1DP-201ENST00000635586 771 ntBASIC1.65□□□□□ -2.15
LIMD2Q9BT23 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
LIMD2Q9BT23 ZNF519P1-201ENST00000449011 1626 ntBASIC1.65□□□□□ -2.15
LIMD2Q9BT23 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
LIMD2Q9BT23 AC073346.2-201ENST00000624724 2058 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms