Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
USB1Q9BQ65 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.85□□□□□ -1.47
USB1Q9BQ65 AC100778.3-201ENST00000580060 1750 ntBASIC5.85□□□□□ -1.47
USB1Q9BQ65 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
USB1Q9BQ65 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.85□□□□□ -1.47
USB1Q9BQ65 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
USB1Q9BQ65 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
USB1Q9BQ65 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.85□□□□□ -1.47
USB1Q9BQ65 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC5.85□□□□□ -1.47
USB1Q9BQ65 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
USB1Q9BQ65 AC020633.1-201ENST00000468439 2247 ntBASIC5.85□□□□□ -1.47
USB1Q9BQ65 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USB1Q9BQ65 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USB1Q9BQ65 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USB1Q9BQ65 Y_RNA.240-201ENST00000364469 95 ntBASIC5.85□□□□□ -1.47
USB1Q9BQ65 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
USB1Q9BQ65 RNU6-22P-201ENST00000384355 107 ntBASIC5.85□□□□□ -1.47
USB1Q9BQ65 SNORA53-201ENST00000391141 249 ntBASIC5.85□□□□□ -1.47
USB1Q9BQ65 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
USB1Q9BQ65 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.85□□□□□ -1.47
USB1Q9BQ65 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.85□□□□□ -1.47
USB1Q9BQ65 GAPDHP48-201ENST00000436626 961 ntBASIC5.85□□□□□ -1.47
USB1Q9BQ65 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.85□□□□□ -1.47
USB1Q9BQ65 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.85□□□□□ -1.47
USB1Q9BQ65 HSPE1P25-201ENST00000455484 251 ntBASIC5.85□□□□□ -1.47
USB1Q9BQ65 AC087477.1-201ENST00000465747 340 ntBASIC5.85□□□□□ -1.47
USB1Q9BQ65 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.85□□□□□ -1.47
USB1Q9BQ65 AC044810.1-201ENST00000480271 711 ntBASIC5.85□□□□□ -1.47
USB1Q9BQ65 RN7SL413P-201ENST00000482700 297 ntBASIC5.85□□□□□ -1.47
USB1Q9BQ65 AC015524.1-201ENST00000491585 472 ntBASIC5.85□□□□□ -1.47
USB1Q9BQ65 RNU6-62P-201ENST00000516526 102 ntBASIC5.85□□□□□ -1.47
USB1Q9BQ65 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.85□□□□□ -1.47
USB1Q9BQ65 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.85□□□□□ -1.47
USB1Q9BQ65 AP006245.1-201ENST00000522549 120 ntBASIC5.85□□□□□ -1.47
USB1Q9BQ65 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.85□□□□□ -1.47
USB1Q9BQ65 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.85□□□□□ -1.47
USB1Q9BQ65 AP003115.1-201ENST00000569849 463 ntBASIC5.85□□□□□ -1.47
USB1Q9BQ65 MIR5095-201ENST00000578844 88 ntBASIC5.85□□□□□ -1.47
USB1Q9BQ65 AL162424.1-201ENST00000602325 221 ntBASIC5.85□□□□□ -1.47
USB1Q9BQ65 AP000787.2-201ENST00000604432 568 ntBASIC5.85□□□□□ -1.47
USB1Q9BQ65 SNORA74.4-201ENST00000607595 199 ntBASIC5.85□□□□□ -1.47
USB1Q9BQ65 AC131009.3-201ENST00000621809 287 ntBASIC5.85□□□□□ -1.47
USB1Q9BQ65 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
USB1Q9BQ65 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
USB1Q9BQ65 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC5.85□□□□□ -1.47
USB1Q9BQ65 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
USB1Q9BQ65 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USB1Q9BQ65 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
USB1Q9BQ65 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USB1Q9BQ65 AC023245.2-201ENST00000530760 2978 ntBASIC5.85□□□□□ -1.47
USB1Q9BQ65 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USB1Q9BQ65 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
USB1Q9BQ65 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
USB1Q9BQ65 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
USB1Q9BQ65 AL591848.4-201ENST00000567832 3472 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.84□□□□□ -1.47
USB1Q9BQ65 AC010266.2-201ENST00000564741 3255 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 AL078621.3-201ENST00000623707 2042 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
USB1Q9BQ65 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
USB1Q9BQ65 AC139769.1-204ENST00000472297 1931 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.84□□□□□ -1.47
USB1Q9BQ65 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
USB1Q9BQ65 RNU6-37P-201ENST00000362692 107 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 RNU6-11P-201ENST00000364234 107 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 Y_RNA.233-201ENST00000364407 101 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 RNU6-7-201ENST00000364784 107 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 RNU6-8-201ENST00000365467 107 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 RNU6-25P-201ENST00000383873 107 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 RNU6-1-201ENST00000383898 107 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 Y_RNA.398-201ENST00000383952 99 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 Y_RNA.405-201ENST00000383979 100 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 RNU6-36P-201ENST00000384172 107 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 Y_RNA.451-201ENST00000384200 100 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 RNU6-4P-201ENST00000384205 107 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 RNU6-5P-201ENST00000384238 107 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 RNU6-3P-201ENST00000384314 107 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 RNU6-16P-201ENST00000384385 107 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 RNU6-15P-201ENST00000384534 107 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 Y_RNA.524-201ENST00000384564 100 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 RNU6-2-201ENST00000384627 107 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 RNU6-29P-201ENST00000384637 107 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 Y_RNA.561-201ENST00000384694 100 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 SNORA7A-201ENST00000384765 139 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 RNU6-9-201ENST00000384776 107 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 SSXP9-201ENST00000417503 292 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.84□□□□□ -1.47
USB1Q9BQ65 FAM183DP-201ENST00000421987 399 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 RPL7AP51-201ENST00000422016 760 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.84□□□□□ -1.47
USB1Q9BQ65 AL451062.2-201ENST00000427515 271 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 AC093414.1-201ENST00000434712 514 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 AC245291.3-201ENST00000443400 292 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.84□□□□□ -1.47
USB1Q9BQ65 AC090804.1-201ENST00000448870 490 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 AC079354.2-201ENST00000453523 154 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 RN7SL165P-201ENST00000477476 291 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 AL049830.2-201ENST00000480072 201 ntBASIC5.84□□□□□ -1.47
USB1Q9BQ65 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.84□□□□□ -1.47
USB1Q9BQ65 AC022493.1-201ENST00000492984 337 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms