Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.27□□□□□ -1.89
SSX3Q99909 RNU5A-4P-201ENST00000516588 111 ntBASIC3.27□□□□□ -1.89
SSX3Q99909 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SSX3Q99909 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.27□□□□□ -1.89
SSX3Q99909 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.27□□□□□ -1.89
SSX3Q99909 SETP7-201ENST00000552169 453 ntBASIC3.27□□□□□ -1.89
SSX3Q99909 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.27□□□□□ -1.89
SSX3Q99909 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.27□□□□□ -1.89
SSX3Q99909 AC087465.1-201ENST00000560574 245 ntBASIC3.27□□□□□ -1.89
SSX3Q99909 AC120057.2-201ENST00000571520 271 ntBASIC3.27□□□□□ -1.89
SSX3Q99909 AC099489.2-201ENST00000574976 260 ntBASIC3.27□□□□□ -1.89
SSX3Q99909 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SSX3Q99909 AC234772.3-201ENST00000602277 528 ntBASIC3.27□□□□□ -1.89
SSX3Q99909 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.27□□□□□ -1.89
SSX3Q99909 AC104662.1-201ENST00000604448 511 ntBASIC3.27□□□□□ -1.89
SSX3Q99909 AL592221.1-201ENST00000605266 382 ntBASIC3.27□□□□□ -1.89
SSX3Q99909 AC107952.2-201ENST00000606048 486 ntBASIC3.27□□□□□ -1.89
SSX3Q99909 AC034229.4-201ENST00000607861 441 ntBASIC3.27□□□□□ -1.89
SSX3Q99909 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
SSX3Q99909 AC006111.3-201ENST00000622137 383 ntBASIC3.27□□□□□ -1.89
SSX3Q99909 MIR6500-201ENST00000622700 86 ntBASIC3.27□□□□□ -1.89
SSX3Q99909 AL356585.4-201ENST00000623078 1229 ntBASIC3.27□□□□□ -1.89
SSX3Q99909 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
SSX3Q99909 CEP170P1-201ENST00000502249 4587 ntBASIC3.27□□□□□ -1.89
SSX3Q99909 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SSX3Q99909 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.27□□□□□ -1.89
SSX3Q99909 AL022578.1-201ENST00000439330 1433 ntBASIC3.27□□□□□ -1.89
SSX3Q99909 OR4G11P-202ENST00000642116 1414 ntBASIC3.27□□□□□ -1.89
SSX3Q99909 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.26□□□□□ -1.89
SSX3Q99909 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.26□□□□□ -1.89
SSX3Q99909 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SSX3Q99909 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
SSX3Q99909 SRP72P2-201ENST00000344851 1979 ntBASIC3.26□□□□□ -1.89
SSX3Q99909 RNU6-28P-201ENST00000362378 107 ntBASIC3.26□□□□□ -1.89
SSX3Q99909 AC025750.1-201ENST00000399891 379 ntBASIC3.26□□□□□ -1.89
SSX3Q99909 RNU6-1077P-201ENST00000410506 102 ntBASIC3.26□□□□□ -1.89
SSX3Q99909 RPS15AP38-201ENST00000413110 372 ntBASIC3.26□□□□□ -1.89
SSX3Q99909 MTCYBP38-201ENST00000417160 1123 ntBASIC3.26□□□□□ -1.89
SSX3Q99909 RPL22P18-201ENST00000417197 377 ntBASIC3.26□□□□□ -1.89
SSX3Q99909 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.26□□□□□ -1.89
SSX3Q99909 AL137014.1-201ENST00000420490 1226 ntBASIC3.26□□□□□ -1.89
SSX3Q99909 HSPE1P1-201ENST00000421494 318 ntBASIC3.26□□□□□ -1.89
SSX3Q99909 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.26□□□□□ -1.89
SSX3Q99909 AL953862.1-201ENST00000423016 168 ntBASIC3.26□□□□□ -1.89
SSX3Q99909 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.26□□□□□ -1.89
SSX3Q99909 EZH2P1-201ENST00000431167 291 ntBASIC3.26□□□□□ -1.89
SSX3Q99909 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.26□□□□□ -1.89
SSX3Q99909 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.26□□□□□ -1.89
SSX3Q99909 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.26□□□□□ -1.89
SSX3Q99909 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.26□□□□□ -1.89
SSX3Q99909 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.26□□□□□ -1.89
SSX3Q99909 SDCBPP1-201ENST00000440192 890 ntBASIC3.26□□□□□ -1.89
SSX3Q99909 TRIM60P18-201ENST00000441518 828 ntBASIC3.26□□□□□ -1.89
SSX3Q99909 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SSX3Q99909 AL500522.2-201ENST00000448562 343 ntBASIC3.26□□□□□ -1.89
SSX3Q99909 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.26□□□□□ -1.89
SSX3Q99909 AC140076.1-201ENST00000449897 361 ntBASIC3.26□□□□□ -1.89
SSX3Q99909 RPL36AP33-201ENST00000450395 310 ntBASIC3.26□□□□□ -1.89
SSX3Q99909 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.26□□□□□ -1.89
SSX3Q99909 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.26□□□□□ -1.89
SSX3Q99909 AC093281.2-201ENST00000510153 597 ntBASIC3.26□□□□□ -1.89
SSX3Q99909 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.26□□□□□ -1.89
SSX3Q99909 RNU7-143P-201ENST00000516781 65 ntBASIC3.26□□□□□ -1.89
SSX3Q99909 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SSX3Q99909 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.26□□□□□ -1.89
SSX3Q99909 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SSX3Q99909 AC023050.2-201ENST00000544968 387 ntBASIC3.26□□□□□ -1.89
SSX3Q99909 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.26□□□□□ -1.89
SSX3Q99909 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.26□□□□□ -1.89
SSX3Q99909 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.26□□□□□ -1.89
SSX3Q99909 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.26□□□□□ -1.89
SSX3Q99909 AC025588.2-201ENST00000604851 466 ntBASIC3.26□□□□□ -1.89
SSX3Q99909 MIR6868-201ENST00000611215 58 ntBASIC3.26□□□□□ -1.89
SSX3Q99909 CRYM-AS1-204ENST00000637983 556 ntBASIC3.26□□□□□ -1.89
SSX3Q99909 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SSX3Q99909 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SSX3Q99909 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SSX3Q99909 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.26□□□□□ -1.89
SSX3Q99909 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
SSX3Q99909 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
SSX3Q99909 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.25□□□□□ -1.89
SSX3Q99909 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SSX3Q99909 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SSX3Q99909 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
SSX3Q99909 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.25□□□□□ -1.89
SSX3Q99909 RNU6-1155P-201ENST00000363554 107 ntBASIC3.25□□□□□ -1.89
SSX3Q99909 RN7SKP280-201ENST00000364196 304 ntBASIC3.25□□□□□ -1.89
SSX3Q99909 RNU4-28P-201ENST00000364739 141 ntBASIC3.25□□□□□ -1.89
SSX3Q99909 RNU6-157P-201ENST00000383957 107 ntBASIC3.25□□□□□ -1.89
SSX3Q99909 PGBD4P8-201ENST00000412993 562 ntBASIC3.25□□□□□ -1.89
SSX3Q99909 HIGD1AP15-201ENST00000416198 280 ntBASIC3.25□□□□□ -1.89
SSX3Q99909 RPS24P7-201ENST00000416921 246 ntBASIC3.25□□□□□ -1.89
SSX3Q99909 SSXP9-201ENST00000417503 292 ntBASIC3.25□□□□□ -1.89
SSX3Q99909 MTATP6P4-201ENST00000427725 675 ntBASIC3.25□□□□□ -1.89
SSX3Q99909 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.25□□□□□ -1.89
SSX3Q99909 AC004866.2-201ENST00000438285 481 ntBASIC3.25□□□□□ -1.89
SSX3Q99909 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.25□□□□□ -1.89
SSX3Q99909 RAC1P7-201ENST00000445367 377 ntBASIC3.25□□□□□ -1.89
SSX3Q99909 CDC27P1-201ENST00000445384 715 ntBASIC3.25□□□□□ -1.89
SSX3Q99909 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms